Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4500 |
Symbol | |
ID | 8667794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5017507 |
End bp | 5018724 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | major facilitator superfamily transporter |
Protein accession | YP_003340109 |
Protein GI | 271965913 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGTG CCGTACACCT GATGGCCCTC GGCGTCTTCG CCATGGTGAC CAGCGAGTTC GCCGTCGCCG GACTGATGCC GCAGATGGCC GACGGGCTGA GCGCCACCAT CCCGCAGATC GGCTACCTCA TCACCGCCTT CGCGGTCGCC ATGGCCGCCG GCGGGCCCTT CCTCACCATC GCGGTGCTGA AACTGCGCCC CAAACCGGCA CTCATGGTGC TGTTCGCGAT CTTCCTGGTG GGCAACCTGC TGGCCGCCAC CGCCCCCTCC TATCCGATCA TGATGGCGGC ACGCATCATC ACCGGCATCG CCGCCCAGGC GTTCTTCGGA GTCGCCATCT CACTGGCTGT CCGGCTGACG CCTCCGCAGA GTCGCGGCCG GGCCATCGCG GTGGTCATGA ACGGGCTGAT GGTGGGCACC CTGCTGGGGC TGCCGCTGTC CACCCTGATC GGAGAACACC TGGGCTGGCG CGCCGCGTTC TGGGCCGTCA GCGCCGTGGC CGCCCTTGCC GCGCTCGCCA CGATGATCGG TGTGCCCCGG CTGGAGCGCG CCGAAGGCGA CGGTGGCGAC TTCCGGCAGG AGATGCGCGT CTTCACGAAA CCCAAGCTGT GGCTGGTGTT CGCGACCAGC ACCCTCATCA TCGGCGCGAC CTTCTCCGCC TTCAGCTACC TAAACCCGAT CCTCACCCAG GTCACCGGAT TCAGCGCCGG AACCGTCCCG CTTCTGCTCA TCGCCTACGG CGCCGCCACC GTGGTCGGCA ACAACATCGT CGGACGCCTC GCCGACCGGC ACACCGTCAG CGTCCAGCTG TGGGGACTGG CCCTGAACCT GATCTTCCTG ACCGGGTTCG CGCTGCTGGC CCACCTCAGC ATCCCCGCCG TGGTGCTCAT GCTCGGCATC GGCCTGGTCG GCGTCACCAT GAACCCGGCG ATGGTCACCC GCGTCCAGCG AACCGGCAAC GCCCGGCCAC TGGTCAACAC CGTCCACTCC TCCTTCATCA CCCTCGGCGT CATCATCGGC TCCTTCGCCG GAGGAATGGC CATCGACGAC TTCGGCCTGC GAGCCCCGCT GTGGCTCGGC GCCGGGTTGG CCGCACTCGG GATCCTCACC CTTGTCCCCG ACCTCATCCG CCGCTCCGCC GCCAAACCCG CACCCGCGCC CAACGCGCCC GCCGCCGGGG GAGGGCCCGC CGTGGACGCC CGAAAGCACA TGGTCTAG
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Protein sequence | MPRAVHLMAL GVFAMVTSEF AVAGLMPQMA DGLSATIPQI GYLITAFAVA MAAGGPFLTI AVLKLRPKPA LMVLFAIFLV GNLLAATAPS YPIMMAARII TGIAAQAFFG VAISLAVRLT PPQSRGRAIA VVMNGLMVGT LLGLPLSTLI GEHLGWRAAF WAVSAVAALA ALATMIGVPR LERAEGDGGD FRQEMRVFTK PKLWLVFATS TLIIGATFSA FSYLNPILTQ VTGFSAGTVP LLLIAYGAAT VVGNNIVGRL ADRHTVSVQL WGLALNLIFL TGFALLAHLS IPAVVLMLGI GLVGVTMNPA MVTRVQRTGN ARPLVNTVHS SFITLGVIIG SFAGGMAIDD FGLRAPLWLG AGLAALGILT LVPDLIRRSA AKPAPAPNAP AAGGGPAVDA RKHMV
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