Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4484 |
Symbol | |
ID | 8667778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5001700 |
End bp | 5002494 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | PEP phosphonomutase |
Protein accession | YP_003340094 |
Protein GI | 271965898 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000284716 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTTCG AGCGCTTCAG GGCGTTGCAC CACGGTCCGG AGCCGTTGCT GCTGCCCAAC GCCTGGGATC ACGCCTCGGC GGCGGCACTG GCGGCGGCCG GGTTCGCCGC GGTGGCGACC ACGAGCCTGG GGGTGGCGGC CGCCGCGGGC CTGCCCGACG CCGAGCAGGC GACCTGGGCC CAGACCGTGA CGCTGGCGCG CGGGATCGCG ACGCTGGGCG TGCCCGTCAC CGTGGACATC GAAGGGGGCT TCGGCGGCCC GCCCGCCCGG GTGGCCGAAC GGGCCGCGGA ACTGGCGGCC GCGGGGGTGG CGGGCGTCAA CATCGAAGAC GGGCGGGGTC AGGGGCTGGC GGAGGTGGCC GAGCAGGTGG CGCTGATCGG CGCGATCAAG CAGCGGGTGC CGCGACTGTT CGTCAACGCC CGCACCGACC CGTTCTGGCT GCGGGCCCCC GACGCCCTGG CCACGGCCGT GCACCGCGTC AGGGCCTACG CCGACGCGGG GGCCGACGGG GTGTTCGTGC CGGGAGCCTA CGGGGAGCCG GAGGTGCAGG CCCTGGCCGC CGCGGCCCCG GTGCCGCTGA ACGTGCTCAT CCAGCCGCAG GTGCCGGTGG CGAGGCTGGC GGCCCTGGGC GTGGCCCGGA TCAGCTACGG CTCCCTGCTG TTCCGCGCCG CACTGCGGGC GGCCGTCACC ACCGCGCTCC AGGTGGCCGC CGGCGCCCCG GTCCCCGGCG ACCTGCCCTC CTACGAGCAG GTCCAGCGGC TGCGGCACCG GCCCGGACTC CCGGATCCGG CCTGA
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Protein sequence | MTFERFRALH HGPEPLLLPN AWDHASAAAL AAAGFAAVAT TSLGVAAAAG LPDAEQATWA QTVTLARGIA TLGVPVTVDI EGGFGGPPAR VAERAAELAA AGVAGVNIED GRGQGLAEVA EQVALIGAIK QRVPRLFVNA RTDPFWLRAP DALATAVHRV RAYADAGADG VFVPGAYGEP EVQALAAAAP VPLNVLIQPQ VPVARLAALG VARISYGSLL FRAALRAAVT TALQVAAGAP VPGDLPSYEQ VQRLRHRPGL PDPA
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