Gene Sros_4372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4372 
Symbol 
ID8667666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4879098 
End bp4880276 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content67% 
IMG OID 
Productpyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_003339998 
Protein GI271965802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CCACCAGCAC CGTGATCGAT ACCCCGTTCC TCTACGACAG GTCCGGCCGG 
CGTTACGCGG TCACCGACCG GCGCTGGCGC GGTGAGGACG GGACGCCTCT CGCACTCAGC
CCGATGCCAG GGCTCACGCC CGACCAGATC GACACCAGCG AACGCTCCCT TTGGCGCTAC
CATGCCGCGA TCCCGGTCTC CCCTCGACAC CGGGTGAGTC TCGGAGAGGG CTTCACCCCC
ATGCTGCCAC TGGACTGGAA CGGGCTGCGC GTTCACTTCA AGCTCGAGTG GTTCAACCCC
ACCTCCAGCT TCAAGGACCG CGGCATCACG GTGATGATCT CCCACCTGCG CGGACAGGGA
GAGACGCACG TCCTTGAGGA CAGCTCCGGC AACGGCGGCT CCTCGGTCGC GGCCTACGCG
GCTGCCGCCG GGATTCACGC CAAGATCATC GTCCCCGCGG CGACGTCGGC CGCCAAGATC
CTCCAGGCAC GCGCGTACGG CGCCCAGATC GAACTCGTCG AAGGCACTCG GGAGCAGGTG
TCCGACGAGG CGATCCGTCA GTCTGAGCAG ATCCCCTACG CCAGCCACAA TTGGCACCCG
TTCTTTCTGC AGGGCACCAA GACGATCGCC TACGAGATGT GGGAGTCGCT CGGGTTCAGG
GCGCCTGACA ACATCGTGCT CGTAGCGGGT GCGGGCAGCA ACATCCTCGG CTGTGACATC
GCGTTCAGCG AGCTGCTCGA AGCGCGTCAG ATCGACAGAC GCCCCAAACT TCTGGTCGGC
CAACCGGAGC ACTGGGCCAC CATCGCGGAC GCGGTGAACG GGATCGATCC GCGGAGCCGG
GGACCGCGGG TCCCGACGAT CGCGGAAGGA GCCTCCATCG CCAACCCGGT CCGGCTCCCG
GAGACCGTCG AGGCGATCCG TCGCTCAGGT GGTGCGGCAG TGGCGGTCAC CGAGGACCAG
ATCCGTACAG CCGTGCGCAA GCTGGCCTCG CGTGGTCTGT ACGCCGAGCC GACCAGCAGC
GTCGCCGCAG CGGCCCTCGA TCACTTCATG GCCGACGGCG CCATCGGCCC TGACGAGACC
ACCGTCGTTA TCCTCACCGG CGCCGGACTC AAGTCCGCAG AGAAGATGGC CGCTGTCTTC
GACACCGACA GCAATCCAGA CGAGGAGAGC CACGCGTGA
 
Protein sequence
MNDTTSTVID TPFLYDRSGR RYAVTDRRWR GEDGTPLALS PMPGLTPDQI DTSERSLWRY 
HAAIPVSPRH RVSLGEGFTP MLPLDWNGLR VHFKLEWFNP TSSFKDRGIT VMISHLRGQG
ETHVLEDSSG NGGSSVAAYA AAAGIHAKII VPAATSAAKI LQARAYGAQI ELVEGTREQV
SDEAIRQSEQ IPYASHNWHP FFLQGTKTIA YEMWESLGFR APDNIVLVAG AGSNILGCDI
AFSELLEARQ IDRRPKLLVG QPEHWATIAD AVNGIDPRSR GPRVPTIAEG ASIANPVRLP
ETVEAIRRSG GAAVAVTEDQ IRTAVRKLAS RGLYAEPTSS VAAAALDHFM ADGAIGPDET
TVVILTGAGL KSAEKMAAVF DTDSNPDEES HA