Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4287 |
Symbol | |
ID | 8667581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4784258 |
End bp | 4787842 |
Gene Length | 3585 bp |
Protein Length | 1194 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | HEAT repeat-domain-containing protein-like protein |
Protein accession | YP_003339920 |
Protein GI | 271965724 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.248989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAGC GTGGCGGCGG ACTTGTCCAC CTGAGGGTCT TCCTTTCGTC CCCGGGAGAT GTGGCCGACG AGCGGGAGAT CGCCCGCACC GTCGTCGAGC AGCTCCAGTA CGACCCTTTC GTGCGCGGCC GCGTCACGTT CGACGTGGTC GCCTGGGACC AGCCGGGCGG CGGCGCGCCC ATCACGGCGA CCGAGACGCC CCAGGCCTCG ATCGATCGGG GCCTCCCGCG CCCGTCCCAG TGCGACGTCG TCGTCGTGAT CCTGTGGTCC CGGATGGGCA CGCCGCTGCC GTTTCCCGAG TACCGCAAGC CGGATGGCGG GGCCTACCTC TCGGGCACCG AGTGGGAGTA CGAGGACGCC CTGCGTGGCG CGGCGGCCGC CGGCCGGCCC ACGGTGCTCG TCTACCGTCG CACCGCCAAG GTGATGCTCG ACTCGGATGC CGCGGACGTG GAGGAGCGGC TGCGAGACAA ACGGCTGGTG AACGAGTTCT TCGAACGGAT GCGTGACCCG CGCACGGGCG CCGCGCTACG CGGCCACAAG CGCTACGGGT CGCCGGACGG CTTCCGCGCC GAGTTCCAGC ACGACCTCAA GTCGCTGGTC CACCAGATCA TCAACGCCGC GCCGGGCGGC GCGAAGCCGC CGCGCCGCTC GGCGGATCTG CCGCCGCCGT GGGAGGGGTC GCCGTTTCCC GGGTTGCGCG CGTTCACACC GCAGGACGCG CCGATCTTCT TCGGCAGGGG CAGGGAGACC GACGAGCTCG TGGCACGGGT GACCGCAAGC GGATTCGTGG CCGTGGTGGG GGCGAGCGGG TCGGGCAAAT CCTCGCTGGT GGGTGCCGGT CTGATCCCTC GCCTCGAACT GAGCGGGACC GGGTGGATCT TTCCACGCTA CGACAGGACG GACATGCGAT GGTCAGGTCT GCGGTTCACC CCCGGCGAGG TGGGTGACAA CCCCTTCCTC GCCACCGCGG CGAAACTCGC TCCGCTGGTG GGAGCCGACG CGGCCGTGCT GGCCGACGAA CTGGCCGCCG GGCCGTACGG CATCGTCAGC CGACTGCCCG GCGGAACATC GATGATCTTC GTCGACCAGT TCGAGGAACT GTTCACCATG GTGGACCCGG CCCGCGTGCG CCCGTGGGTG CGGCTCCTTG AAGCGGCCGC GCTGTCCGGG CGGTGCCATG TCGTCATCAC CCTGCGAGCG GACTTCTACC ACCGTTGCCT GGCGGTCCCC GAGCTCGCCC GCCTTCTGGA GGCCGGGCAG TTTCCGCTCG GCGCCCCCAC CGACACTCTG CCCGACATGA TCATGCGGCC GGCCGAACGG GCAGATCTCC GGTTCGTCGA AGGACTGCCC GGCCGGATCC TGCGTGACAC CGGTGGCGAC GCGGACGCGC TGCCGCTGCT GGCCTACACC CTGGATGAGC TCTGCCGGGC CGGCCAGGCG GAGCGGCTGC TGGACTTCGC CACCTACGAG AGGCTCGGTG GCGTGCAGGG CGCGATCGGC ACCCGGGCCG AGCACGTCTT CACCCAGCTG CTCGACGAGC AGGCGCGTGC CGCGTTCTCC CGGGTGTTCC GCGAGCTGGT GAAGGTGGAC GAGCGGGGCA GGTCCACCCG CCGGAGGGCA CGGCTGGCGC AGATCGCCGG GGACGGCCCC GCGCGCCGGT TCGTCGAGGT GCTGACGAAC GCCCGGCTCC TCGTGCAGAG CAAGGACGAG CGCGACCAGC CCATCGTCTA CGTCGCGCAC GAGGCGCTGT TCGGAAGCTG GGCCCGTCTC TCCGGCTGGA TCCAGGCGAT CCGGGAAGAC CTTCTGCTGG AGCACAAGGT CACCGCCGCC GCCGCCGAAT GGGCGCAGCA CGGCCGGGAC GAGGCGTTCC GCTGGCCGCA CGAGCGGCTG GAACCGGTCT ACGCGATGGT GCGGCGCCTG GGTGCCGACC TCGACCCGGT CACCGCGGAG TTCGTCGAGC CAGAGCACGA TCGGCTCTTC CCCGTGCTCC GCGATCCGGA TGTGGAGACC TACCGGCGGC AGAACACCAT GGACCGGTTG TTCACGATCG GCGCCACGAC CGTGCCCGGC CTGCTCGACA TGCTGGGCGA TCCGTCAGCC GTGGCGCGGC AGGCCGCGGC CGGCGTGCTG GCCAGGCTGG GGGAACCGGC GATCGAGGGG CTGGTCGCGG CGCTGGGGCA CGGCGACCCG GAGGTTCGGC TGGCGGCCCT CGGCGCGCTA CGGCAGCTCG GCGACCCCCG GGTCGCGGGG AAACTCGCCC CGGCGCTGCG TGATCCCGAC ATCAGGGTGC GGTCAGCGGC CGTCGGCGCG CTCACCTCGT TCGGCGGACC GACGGCCAGG GATATGCTCG GCGCCGCGGT GACCGATGAG CAGGCCGACG TACGCTGGCT GGCGGCGGGC GCGCTCGGGG CGTTCGGCCC CGAGGCGGTG CCGCACCTCC TCTCCGTCGG GGATGACGAC GACACCGCGA CGGAGTCCGC GAGGCGCGCC CTGCTGGCGA TCGGCGACCG GGGCATCGAG CCGCTGCTCG AGGGCTTACG CGGCCTGGAC CCACGCCGGC GGGTCAACGC TGCGGCGACC CTCGCGGGGC TGGGGGCGTC CGCGGTTCCC GGACTTGTCG TGGCGCTCGG CGACGCCGAT CCGGATGTGC GGTGGCAGGC GTGCGAGGCC CTGGCCGTGA TCGCCGACGA CGGCTGCGTG TCGTCGCTGA CATCGACACT GGACGATGCG GAACCGGCGG TCCGCGCCGC GGCCGCGCAC GCGCTCGGCG CGCTGCGCGC CGAGGGCGCC GTCGCCCGGT TGACGGCCGC ACTGGTCGAC GACGACCACG TCGTGCGGTG GGCGGCGACC GACGCGCTCG CCCAGATCGG CAGGACTTCG GTCCAGCCGC TGCTCGCCGC GGCGTCGGCG CCGGGCCCCG GCGGCTCGAT GGTGTCGGCG GCACTGATCA GATGCGCGGA CCCCTCGCTG GTCTCGGCGC TGCGGTCGGA GCACGAGTGG ATACGCCGGC GGGTCATGGA CGTCCTGATC AAGTGGGGTG AGCCCGCGCT GCCGGACCTG TTCGGCCTGC TGGAGGATCC CGATCATCGG ACGCGCGACA CGGCCGCCAG GGCGCTGGCC GGGATCGGGC ACCTCGCCGT GCCCGGCCTG ATCCGGCAGG CCGGCAGCGA CGACCCCGAC ACCCGCTGCG CGGCGGGGCG CGCGCTGCGA TGGATCGCCG TCGACGACAC GCTCACCGAG CGTACGCCGG GCGTCCCCGG TGCCCGCCGG GCGCTGCCCG CGCTGCAGCG ACTTCTCAGC GACGCCGAAC CGCGTTGCCG GGACACGGCC GCCGACGCGC TGGCCGGTTT CGGGCAGGAC GCGCTCCCCG TGGTGTGGCG GGGGCTGGCG GCGCCGTCGC AGCCGACCCG TGCCGCAGCG GTGCGTGCCG CCGTCAGGAT CGGTCCGGCG GCGGTCCCGG GGCTGCTGGT GATGGCCGGT AAGTCCGGGA GCGTCGCGCG AGCGCCCGCG ATCGAGGCGC TGCGCGCGAT CGCGACACCG GCCGCGCTCT TCGGCCTCGC CGAACTGGGC ATGGCGCCGG AATGA
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Protein sequence | MAERGGGLVH LRVFLSSPGD VADEREIART VVEQLQYDPF VRGRVTFDVV AWDQPGGGAP ITATETPQAS IDRGLPRPSQ CDVVVVILWS RMGTPLPFPE YRKPDGGAYL SGTEWEYEDA LRGAAAAGRP TVLVYRRTAK VMLDSDAADV EERLRDKRLV NEFFERMRDP RTGAALRGHK RYGSPDGFRA EFQHDLKSLV HQIINAAPGG AKPPRRSADL PPPWEGSPFP GLRAFTPQDA PIFFGRGRET DELVARVTAS GFVAVVGASG SGKSSLVGAG LIPRLELSGT GWIFPRYDRT DMRWSGLRFT PGEVGDNPFL ATAAKLAPLV GADAAVLADE LAAGPYGIVS RLPGGTSMIF VDQFEELFTM VDPARVRPWV RLLEAAALSG RCHVVITLRA DFYHRCLAVP ELARLLEAGQ FPLGAPTDTL PDMIMRPAER ADLRFVEGLP GRILRDTGGD ADALPLLAYT LDELCRAGQA ERLLDFATYE RLGGVQGAIG TRAEHVFTQL LDEQARAAFS RVFRELVKVD ERGRSTRRRA RLAQIAGDGP ARRFVEVLTN ARLLVQSKDE RDQPIVYVAH EALFGSWARL SGWIQAIRED LLLEHKVTAA AAEWAQHGRD EAFRWPHERL EPVYAMVRRL GADLDPVTAE FVEPEHDRLF PVLRDPDVET YRRQNTMDRL FTIGATTVPG LLDMLGDPSA VARQAAAGVL ARLGEPAIEG LVAALGHGDP EVRLAALGAL RQLGDPRVAG KLAPALRDPD IRVRSAAVGA LTSFGGPTAR DMLGAAVTDE QADVRWLAAG ALGAFGPEAV PHLLSVGDDD DTATESARRA LLAIGDRGIE PLLEGLRGLD PRRRVNAAAT LAGLGASAVP GLVVALGDAD PDVRWQACEA LAVIADDGCV SSLTSTLDDA EPAVRAAAAH ALGALRAEGA VARLTAALVD DDHVVRWAAT DALAQIGRTS VQPLLAAASA PGPGGSMVSA ALIRCADPSL VSALRSEHEW IRRRVMDVLI KWGEPALPDL FGLLEDPDHR TRDTAARALA GIGHLAVPGL IRQAGSDDPD TRCAAGRALR WIAVDDTLTE RTPGVPGARR ALPALQRLLS DAEPRCRDTA ADALAGFGQD ALPVVWRGLA APSQPTRAAA VRAAVRIGPA AVPGLLVMAG KSGSVARAPA IEALRAIATP AALFGLAELG MAPE
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