Gene Sros_4267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4267 
Symbol 
ID8667561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4749325 
End bp4750689 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003339907 
Protein GI271965711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.525497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACC GGCTGTCACC GGGTGAGCGT CTGCCCAGCA GCCGCGAGCT GATCCGGCGC 
TACCAGGTCG GCCCCGCCAC CGTGTCACAG GCGATCGCCA CGCTCGCCGC CGAAGGCCTG
GTGGTCACCC GTCCAGGCAG CGGCACGTAC GTGGCAGCAC ACGCCCAGCG GCGCGCCAAA
GTGGCCGATA CCGCCTGGCA GACCGTCACC CTCGCCGACC GGACCGTGGA CACCCGAATC
CTCACCGGCG CCGTCGGTGC GCCGCCCGCA GGTACGATCA TGCTGGACGG CGGCTACCTG
CATCGATCGC TCCAGCCCAC CCAGATCCTG ACCGCGGCGC TGGCCCGCGC CGCACGCCGC
CCCGACGCCT GGGACCGCGC CCCCGCCAGC GGCCTGGCGG CCCTGCGCAG CGTGTTCGCC
ACCATGGCCG GCGGCGGCGT GAGCGCGGAC GACATCCTGG TCACGGCCGG CGGGCAGAGC
GCCCTGTCCA TGGCGTTCCG GGCCATCGCG GCGCCGGGTG ACCCCGTCCT GATGGAGTCG
CCCACCTATC CGGGAGCGAT AGCCGCCGCC AGGGCAGCCG GCCTGCGCCC GGTACCGGTG
CCGATGGATG CCGACGGCCT GCAACCCGAC CTCCTGGCCG ACGCCTTCGC CATGACCCGC
GCACGCCTGC TGTACTGCCA GCCGGCCTAT CACAACCCCA CCGGCACCGT GCTGGCGCCA
CAACGCCGCC GACAGATCAT CGATGCGGCC AGGGCGGCGG GCGCATTCGT GATCGAGGAC
GACTTCGCGC GACACCTCGG CCACGGCACG CCGGTGCCAC CGCCCCTGCT GGCCGACGAT
CGCGACGGCA CGGTGGTCTA CCTGACCTCG CTCACCAAAC CGGCGGCGCC GAGCCTGCGC
ATCGGCGCCC TGGTGGCCCG AGGCCCGGTG ATGGAACGCC TGCGCGCCAC CCGCCTGGTC
GACGACTTCT TCGTCACCCG CCCGCTCCAG GAAACAGCGC TCGAACTCCT TAGCTCTCCC
ACGTGGGAAC GGCATGTCCG TTCTCTGGCC GCAGCCCTGC GGGAGCGGTG CGGAGCGCTG
GCGGCCGCCG TCACGCACGA ACTTCCCCAC TGGACCCTCA CCCGCATCCC CACGGGCGGA
CTGCACCTGT GGGTCCGCCT GCCGTACGGC ACGGACGACA CCGTGATCGC CGACACGGCT
CGTCAGCACG GCGTCGCCGT CAGTGCCGGC AACCGCTACT TCGCCACCGA GCTCCCGGCG
GCCTATCTAC GCCTCGGCTT CGCCGCCACC GCCGACCGCA CCGAGCTGAT CGAAGCCGCA
CGCCGACTCG CATCCGCCCA CGAGCACGCC GCCGGCACGC GCTGA
 
Protein sequence
MIDRLSPGER LPSSRELIRR YQVGPATVSQ AIATLAAEGL VVTRPGSGTY VAAHAQRRAK 
VADTAWQTVT LADRTVDTRI LTGAVGAPPA GTIMLDGGYL HRSLQPTQIL TAALARAARR
PDAWDRAPAS GLAALRSVFA TMAGGGVSAD DILVTAGGQS ALSMAFRAIA APGDPVLMES
PTYPGAIAAA RAAGLRPVPV PMDADGLQPD LLADAFAMTR ARLLYCQPAY HNPTGTVLAP
QRRRQIIDAA RAAGAFVIED DFARHLGHGT PVPPPLLADD RDGTVVYLTS LTKPAAPSLR
IGALVARGPV MERLRATRLV DDFFVTRPLQ ETALELLSSP TWERHVRSLA AALRERCGAL
AAAVTHELPH WTLTRIPTGG LHLWVRLPYG TDDTVIADTA RQHGVAVSAG NRYFATELPA
AYLRLGFAAT ADRTELIEAA RRLASAHEHA AGTR