Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4267 |
Symbol | |
ID | 8667561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4749325 |
End bp | 4750689 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003339907 |
Protein GI | 271965711 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.525497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGACC GGCTGTCACC GGGTGAGCGT CTGCCCAGCA GCCGCGAGCT GATCCGGCGC TACCAGGTCG GCCCCGCCAC CGTGTCACAG GCGATCGCCA CGCTCGCCGC CGAAGGCCTG GTGGTCACCC GTCCAGGCAG CGGCACGTAC GTGGCAGCAC ACGCCCAGCG GCGCGCCAAA GTGGCCGATA CCGCCTGGCA GACCGTCACC CTCGCCGACC GGACCGTGGA CACCCGAATC CTCACCGGCG CCGTCGGTGC GCCGCCCGCA GGTACGATCA TGCTGGACGG CGGCTACCTG CATCGATCGC TCCAGCCCAC CCAGATCCTG ACCGCGGCGC TGGCCCGCGC CGCACGCCGC CCCGACGCCT GGGACCGCGC CCCCGCCAGC GGCCTGGCGG CCCTGCGCAG CGTGTTCGCC ACCATGGCCG GCGGCGGCGT GAGCGCGGAC GACATCCTGG TCACGGCCGG CGGGCAGAGC GCCCTGTCCA TGGCGTTCCG GGCCATCGCG GCGCCGGGTG ACCCCGTCCT GATGGAGTCG CCCACCTATC CGGGAGCGAT AGCCGCCGCC AGGGCAGCCG GCCTGCGCCC GGTACCGGTG CCGATGGATG CCGACGGCCT GCAACCCGAC CTCCTGGCCG ACGCCTTCGC CATGACCCGC GCACGCCTGC TGTACTGCCA GCCGGCCTAT CACAACCCCA CCGGCACCGT GCTGGCGCCA CAACGCCGCC GACAGATCAT CGATGCGGCC AGGGCGGCGG GCGCATTCGT GATCGAGGAC GACTTCGCGC GACACCTCGG CCACGGCACG CCGGTGCCAC CGCCCCTGCT GGCCGACGAT CGCGACGGCA CGGTGGTCTA CCTGACCTCG CTCACCAAAC CGGCGGCGCC GAGCCTGCGC ATCGGCGCCC TGGTGGCCCG AGGCCCGGTG ATGGAACGCC TGCGCGCCAC CCGCCTGGTC GACGACTTCT TCGTCACCCG CCCGCTCCAG GAAACAGCGC TCGAACTCCT TAGCTCTCCC ACGTGGGAAC GGCATGTCCG TTCTCTGGCC GCAGCCCTGC GGGAGCGGTG CGGAGCGCTG GCGGCCGCCG TCACGCACGA ACTTCCCCAC TGGACCCTCA CCCGCATCCC CACGGGCGGA CTGCACCTGT GGGTCCGCCT GCCGTACGGC ACGGACGACA CCGTGATCGC CGACACGGCT CGTCAGCACG GCGTCGCCGT CAGTGCCGGC AACCGCTACT TCGCCACCGA GCTCCCGGCG GCCTATCTAC GCCTCGGCTT CGCCGCCACC GCCGACCGCA CCGAGCTGAT CGAAGCCGCA CGCCGACTCG CATCCGCCCA CGAGCACGCC GCCGGCACGC GCTGA
|
Protein sequence | MIDRLSPGER LPSSRELIRR YQVGPATVSQ AIATLAAEGL VVTRPGSGTY VAAHAQRRAK VADTAWQTVT LADRTVDTRI LTGAVGAPPA GTIMLDGGYL HRSLQPTQIL TAALARAARR PDAWDRAPAS GLAALRSVFA TMAGGGVSAD DILVTAGGQS ALSMAFRAIA APGDPVLMES PTYPGAIAAA RAAGLRPVPV PMDADGLQPD LLADAFAMTR ARLLYCQPAY HNPTGTVLAP QRRRQIIDAA RAAGAFVIED DFARHLGHGT PVPPPLLADD RDGTVVYLTS LTKPAAPSLR IGALVARGPV MERLRATRLV DDFFVTRPLQ ETALELLSSP TWERHVRSLA AALRERCGAL AAAVTHELPH WTLTRIPTGG LHLWVRLPYG TDDTVIADTA RQHGVAVSAG NRYFATELPA AYLRLGFAAT ADRTELIEAA RRLASAHEHA AGTR
|
| |