| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4258 |
|---|
| Symbol | |
|---|
| ID | 8667552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4742226 |
|---|
| End bp | 4742987 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003339900 |
|---|
| Protein GI | 271965704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.53611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.414505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTC GATTCATCGG CAAGGTCGCC CTCGTCACCG GCGGCGGCTC CGGCATCGGC
CGTGCGACCG CGCGGGCCTT CGCCCGTGAA GGCGCCACCG TCGTCGTCTC CGGGCGTGAC
GCGGAGAATC TCGACCAGAC GGTCAAGCTG ATCGAGGCCG AGAGCGGGCG CGCGAGTTTC
GTCACCGCCG ACGTCACCCG GCAGGAGGAT GTCGCCCGGA TGGTCGCGAC GACCGTGGAG
CGTCACGGCG GCCTGCACAT CGCGCACAAC AATGCCGGTG TCTTCGGCCA GGCCGCTCCG
CTCGCCGACC TCGACGTCGA CGGCTGGCGT GACGTGCTGG ACGTCAACCT GACCGGCGTG
TTCCTGTCGA TGAAATACGA GATCCAGCAC ATGCGCTCGA ATGGCGGAGG CACGATCGTC
AACACCGCCT CCAACATCGG TGCCCATCGC AGGCTTCCGG GGGCGAGCGC GTACGCCACT
TCCAAGGCGG GCGTGAGCTT CCTGACCCGC GCCGCGGCAC TCGACCACAT CGATGACGGC
ATCCGCATCA ACGCGGTCAG CCCCGGAGCC AGCGACGGCC CGATGTCATC GCTGCCCGGC
GAGAGCCGCG AGGAACGCGA CGCCCGTCTC GCCCCGTCGA TTCCGCTCGG TAGGGTCGGC
AACCTCGAGG AGGTCGCCGC CACCGTGCTG TGGCTCGCCT CCCCCGAGTC CGGATTCGCC
GTCGGCCACG ACCTCGTCAT CGACGGCGGC GCCACCGCCT GA
|
|---|
| Protein sequence | MTARFIGKVA LVTGGGSGIG RATARAFARE GATVVVSGRD AENLDQTVKL IEAESGRASF
VTADVTRQED VARMVATTVE RHGGLHIAHN NAGVFGQAAP LADLDVDGWR DVLDVNLTGV
FLSMKYEIQH MRSNGGGTIV NTASNIGAHR RLPGASAYAT SKAGVSFLTR AAALDHIDDG
IRINAVSPGA SDGPMSSLPG ESREERDARL APSIPLGRVG NLEEVAATVL WLASPESGFA
VGHDLVIDGG ATA
|
|---|
| |