Gene Sros_4188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4188 
Symbol 
ID8667482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4661504 
End bp4662727 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content73% 
IMG OID 
Productbeta-ketoacyl synthase 
Protein accessionYP_003339835 
Protein GI271965639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0596786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.949835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG GGGCCCCGCG CCGCGTGGTG GTGACCGGGC TGGGGGCGGT GAGCAGCCTC 
GGCACGGGAG CCCGTACCTT CGCCAAGGCC ATCCGCGAGG GGCGCAGCGG CGTGTCGCCC
ATCCGGAGCT TCGACGCCAG CGGGTTCCCC TACACCTTCG CGGGCGAGGT GCACGACTTC
GAGCCGGAGC GGCTGCTGCG CAGGCTGCGC GTCGACGAGT GGGGGCGCAG CAGCCTCTTC
GCCGCCTCGG CCGCGCGGCT GGCGCTGATG GACGCCGACA TCGACCCCGG CCAGGTCGCG
GCCGCCCGCG CCGGCTCCGC GATGGGGACC ACCCTCGGCG AGTCGGCGGT CATCGAGGCG
CTCACGAGCC AGTGGGTCCA CGGAGGCCTG AAGGATCTCG ACCCGGCGCT GGTGCGCCAG
GCCCCGGCCG GCCGGATCGC CACGGCGGTC AACGCGGAGC TCGGGCTCAC CGGAGAGGCC
CACACCATCG CGACAGCCTG CTCGGCGAGC AACTACACGC TGGGCTACGC CTACGACATG
GTCCGGACCG GAGAGGCCGA GTTCATGATC AGCGGCGGGG CCGACTCCGT CAACCGGTGG
GAGCACGCCG GCTTCTACCG GCTCGGCGCC CTGGCCGAGT CGGTGTGCCG GCCCTTCGAC
ACCCACCGCT CGGGAATCCT GACCGCCGAA GGCGGTGTGG CGCTGTTCCT GGAGCCGCTG
GAGGGCGCGG TGGCCCGCGG GGCGCGGATC TACGCCGAGG TGCTCGGATA CGGCGTCAAC
TGCGACGCCA AGCACCCGGT CGCGCCCGAC CCGACCAGCA TCGCCGAGTG CATCCGAGCC
GCACACCGCA ACGCCGGCGT GCGCCCGGAG GACATCGACT ACATCTGCGC GCACGGCACG
GGGACCCCGA CCAACGACGC CACCGAGGTC AAGGCGGTGC GGGAGGTGTT CGGTGACGAG
CTGCCGCCGA TCAGCTCGAT AAAATCCATG ATCGGCCACA CGATGGGCGC CGCCAGCGGC
TTCGGCGCGC TGATCTGCTG CATGGCGCTG CACGACGGCT TCCTGCCGCC CACGGCCAAC
GTGACGGAGA CCGATCCGGC GCTGGGCCCT GGCGTGGACT GCGTCCCGGG CACGGGACGC
GCGGCGTCGC CGCGGATCGT GCAGAACCAC GGGTTCGCCT TCGGCGGCAA CAACGCGATC
ACGATCCTGG GGAGAGCCGC GTGA
 
Protein sequence
MPEGAPRRVV VTGLGAVSSL GTGARTFAKA IREGRSGVSP IRSFDASGFP YTFAGEVHDF 
EPERLLRRLR VDEWGRSSLF AASAARLALM DADIDPGQVA AARAGSAMGT TLGESAVIEA
LTSQWVHGGL KDLDPALVRQ APAGRIATAV NAELGLTGEA HTIATACSAS NYTLGYAYDM
VRTGEAEFMI SGGADSVNRW EHAGFYRLGA LAESVCRPFD THRSGILTAE GGVALFLEPL
EGAVARGARI YAEVLGYGVN CDAKHPVAPD PTSIAECIRA AHRNAGVRPE DIDYICAHGT
GTPTNDATEV KAVREVFGDE LPPISSIKSM IGHTMGAASG FGALICCMAL HDGFLPPTAN
VTETDPALGP GVDCVPGTGR AASPRIVQNH GFAFGGNNAI TILGRAA