| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4119 |
|---|
| Symbol | |
|---|
| ID | 8667413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4578324 |
|---|
| End bp | 4579283 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | threonine dehydratase catabolic |
|---|
| Protein accession | YP_003339768 |
|---|
| Protein GI | 271965572 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.270071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0644551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGG TGACGGTGGC CGACGTGATC GCCGCCTCGG CCCGCATCGC GCCGTTCGTA
CGGCGCACCC CGCTGCTGCA CCTGCCCGGC GAACGGCTCT GGGTCAAACC CGAGAACCGG
CAGCCCACCG GCTCCTTCAA GGTGCGGGGC GCGGTCAACG CCGTGGGACG GCTGGCCGAG
CGGGGCGTCC AGCACGTCAT CGCCCAGTCC TCCGGCAACC ACGCCCAGGC CATCGCGTAC
GCCGCGGGAA AGCACGGCCT GCGGGTGACC GTGGTCCTGC CCGACACCGC GCCGGAGCTG
AAGGTGGCGG CCGCCCGCAG GCTCGGCGCC GAGGTGGTGA TCGTGCCACC GGCCCTGCGG
GAGGTCACCT GCCTGGCCCT GGCCGACCGG CTCGCGGCCA CGGTGGTCCG CTCCGACGAT
CTCGACGTCA TCGCCGGGCA CGGCAGCGCC GGGACCGAGA TCGGCAGGGA CCTGTCCCGC
GCGGGCACGA TCCTGGTGCC GGTCTGCAAC GGCGGCCTGC TGGCCGGGGT CGCGGTCGCG
GCCAGGGCCG TCGACCCGGC GATCAGGGTG ATCGGCGTCG AGCCCGAGCT GGCCGCCGAC
GGCGTGGCCA GCTTCCGCTC CGGCCGGCGC ACCGCGTGGC CGGTGCAGCA GACCTACCGC
ACCCGGGCCG ACGGCCTGCG CGCCCCGGTC CTGGGCGCCC TGGCCTGGGA GCACATCCAC
CGGTACGTGG ACGACATGGT GACCGTGAGC GAGGACGGCA TCGGGGCCGC CGCCGACCTC
CTCTGGCAGG AGCTGGGGGA ACGCGCCGAG CCCAGCGGCG CGGTGACCAC CGCGGCCTAC
CTCGCCCACC GGGACACGCT GCCGGCCGGG CCGGTGGTGG CGATCCTCTC CGGCGGCAAC
GTGGCGGTCC ATCCCGATGC CGACGACACG AGGGGGCGCT CACTCATCCG GGGCCTGTGA
|
|---|
| Protein sequence | MSLVTVADVI AASARIAPFV RRTPLLHLPG ERLWVKPENR QPTGSFKVRG AVNAVGRLAE
RGVQHVIAQS SGNHAQAIAY AAGKHGLRVT VVLPDTAPEL KVAAARRLGA EVVIVPPALR
EVTCLALADR LAATVVRSDD LDVIAGHGSA GTEIGRDLSR AGTILVPVCN GGLLAGVAVA
ARAVDPAIRV IGVEPELAAD GVASFRSGRR TAWPVQQTYR TRADGLRAPV LGALAWEHIH
RYVDDMVTVS EDGIGAAADL LWQELGERAE PSGAVTTAAY LAHRDTLPAG PVVAILSGGN
VAVHPDADDT RGRSLIRGL
|
|---|
| |