Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4038 |
Symbol | |
ID | 8667332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4496080 |
End bp | 4496811 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | conserved hypothetical protein LmbE |
Protein accession | YP_003339689 |
Protein GI | 271965493 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.07575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0146408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGC AGCTCCAGGC GATGCCCACT GACTGGCAGC GGGCCCTGGC GATCGTGGCC CATCCCGACG ATCTGGAGTA CGGCGCCGCG GCGGCGGTCG CCGCCTGGGG CGACGAGGGC AAGGAGGTCT CCTACCTGCT GGTAACGCGG GGCGAGGCCG GGATCGACTC CCTGGAACCG GTCGAGGCCG CGCCCCTGCG CGAGCAGGAG CAGCGGGCCG GCGCCGCGGT GGTGGGGGTG ACGACGGTGG AGTTCCTCGA CCATCGGGAC GGGGTGATCG AGTACGGCCC GGCCCTCCGC AGGGACCTGG CCGGGGCCAT CCGGCGCCAC CGGCCGGAGC TGGTGGTGAC CATGAACCAC CACGACACCT GGGGCGACAC CACCTGGAAC ACCTCCGACC ACCGGGCGGT GGGCCGGGCC GCGCTGGACG CCGCAGCCGA CGCGGGGAAC CGGTGGATCT TCCCCGAGCT CGCCGACGAC GGGCTCCTCC CCTGGGACGG CGTGCGGTGG GTGGCCGTCG CCGCCTCCCC CCTGCCGACC CACGCGGTGG ACGTCACCGG CGCGCTGGAC CGGGCGGTGC GCTCCCTCCT GGAGCACCGG ACCTACATCG CGGCGCTCAC CGACGAGGAC CCCGAGAGCT ACTGCCGTGC CTTCGCGGAG CAGGCCGCCG TCGAAGCGGG CGCCCGCTTC GGCGGCCGGC CCGCGGTCAC CTTCGAGCTG TTTCCCCGAT GA
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Protein sequence | MSEQLQAMPT DWQRALAIVA HPDDLEYGAA AAVAAWGDEG KEVSYLLVTR GEAGIDSLEP VEAAPLREQE QRAGAAVVGV TTVEFLDHRD GVIEYGPALR RDLAGAIRRH RPELVVTMNH HDTWGDTTWN TSDHRAVGRA ALDAAADAGN RWIFPELADD GLLPWDGVRW VAVAASPLPT HAVDVTGALD RAVRSLLEHR TYIAALTDED PESYCRAFAE QAAVEAGARF GGRPAVTFEL FPR
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