Gene Sros_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4038 
Symbol 
ID8667332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4496080 
End bp4496811 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content75% 
IMG OID 
Productconserved hypothetical protein LmbE 
Protein accessionYP_003339689 
Protein GI271965493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.07575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0146408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC AGCTCCAGGC GATGCCCACT GACTGGCAGC GGGCCCTGGC GATCGTGGCC 
CATCCCGACG ATCTGGAGTA CGGCGCCGCG GCGGCGGTCG CCGCCTGGGG CGACGAGGGC
AAGGAGGTCT CCTACCTGCT GGTAACGCGG GGCGAGGCCG GGATCGACTC CCTGGAACCG
GTCGAGGCCG CGCCCCTGCG CGAGCAGGAG CAGCGGGCCG GCGCCGCGGT GGTGGGGGTG
ACGACGGTGG AGTTCCTCGA CCATCGGGAC GGGGTGATCG AGTACGGCCC GGCCCTCCGC
AGGGACCTGG CCGGGGCCAT CCGGCGCCAC CGGCCGGAGC TGGTGGTGAC CATGAACCAC
CACGACACCT GGGGCGACAC CACCTGGAAC ACCTCCGACC ACCGGGCGGT GGGCCGGGCC
GCGCTGGACG CCGCAGCCGA CGCGGGGAAC CGGTGGATCT TCCCCGAGCT CGCCGACGAC
GGGCTCCTCC CCTGGGACGG CGTGCGGTGG GTGGCCGTCG CCGCCTCCCC CCTGCCGACC
CACGCGGTGG ACGTCACCGG CGCGCTGGAC CGGGCGGTGC GCTCCCTCCT GGAGCACCGG
ACCTACATCG CGGCGCTCAC CGACGAGGAC CCCGAGAGCT ACTGCCGTGC CTTCGCGGAG
CAGGCCGCCG TCGAAGCGGG CGCCCGCTTC GGCGGCCGGC CCGCGGTCAC CTTCGAGCTG
TTTCCCCGAT GA
 
Protein sequence
MSEQLQAMPT DWQRALAIVA HPDDLEYGAA AAVAAWGDEG KEVSYLLVTR GEAGIDSLEP 
VEAAPLREQE QRAGAAVVGV TTVEFLDHRD GVIEYGPALR RDLAGAIRRH RPELVVTMNH
HDTWGDTTWN TSDHRAVGRA ALDAAADAGN RWIFPELADD GLLPWDGVRW VAVAASPLPT
HAVDVTGALD RAVRSLLEHR TYIAALTDED PESYCRAFAE QAAVEAGARF GGRPAVTFEL
FPR