Gene Sros_4026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4026 
Symbol 
ID8667320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4480199 
End bp4482805 
Gene Length2607 bp 
Protein Length868 aa 
Translation table11 
GC content70% 
IMG OID 
ProductATPase AAA-2 domain protein 
Protein accessionYP_003339677 
Protein GI271965481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.15159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.203961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTGA ACCAGTTGAC ACAGAAGTCG CAGGAGGCGC TGCACGACGC CCAGACCAAG 
GCGCTGCGCT TCGGGCACAC CGAGATCGAC GGGGAGCATC TGCTGCTGGC GCTGCTGGAC
CAGCCGGACG GCCTGATCCC CCGCCTGCTC ACCAAGGCCG ACGTCGACCT GGACCGGCTC
GTCGCCGACC TGGAGGCCGA GCTGAGCCGC AGGCCCAAGG TCAGCGGCCC CGGGGTCGAC
CCCGGCCAGG TCCGGGTGAC CCAGCGCCTG TCCCGCCTGC TGGAGACGGC CAAGAGGGAG
GCCGACCGGC TCAAGGACGA CTACGTCTCG GTCGAGCACC TGCTCGTCGC CCTGCTGGAG
GAGGGCAGCG AGACCTCCGC CGGCCGGCTG CTCCGCCAGC AGGGGTTGAG CAGGGACGCC
TTCCTCCGGG TGCTCACCGA GATCCGCGGC AACCAGCGGG TCACCTCGGC GATGCCCGAG
GTCGCCTACG AGGCGCTCGC GAAGTACGGC CGCGACCTGG TCGCCGACGC CGCGGCGGGC
AAGCTCGACC CGGTCATCGG GCGCGACAGC GAGATCCGCC GAGTCATCCA GATCCTGTCC
CGCAAGTCCA AGAACAACCC GGTCCTGGTC GGCGATCCCG GGGTCGGCAA GACCGCCATC
GTCGAGGGCC TCGCCCAGCG GATCAACAAC GGTGACGTGC CCGACGGCCT CAAGGACAAG
ACGGTCTTCA GCCTCGACAT GGGCGCCCTC GTGGCCGGTG CGAAGTACCG GGGCGAGTTC
GAGGAACGCC TCAAGGCGGT GCTCACCGAG GTCGTGGCCG CCGAGGGGCG GATCCTGCTC
TTCGTCGACG AGCTGCACAC GGTCGTGGGC GCGGGCGCGG CCGAGGGCGC CATGGACGCG
GGCAACATGC TCAAGCCCAT GCTGGCCCGC GGCGAGCTGC ACATGATCGG GGCCACGACC
CTGGAGGAGT ACCGCAGGCA CATCGAGAAG GACGCCGCCC TGGAGCGCCG CTTCCAGCCC
GTGATGGTCG ACGAGCCCTC CGTCGAGGAC GCCATCTCGA TCCTGCGCGG TCTGCGCGAG
CGGCTGGAGG TCTTCCACGG CGTGACGATC CAGGACGGCG CGCTGGTGGC CGCCGTCGTG
CTGAGCCACC GCTACATCTC CGACCGCTTC CTGCCGGACA AGGCCATCGA CCTGGTGGAC
GAGGCCTGCG CGATGCTCCG CACCGAGATC GACTCGATGC CCGCCGAGCT CGACGAGCTC
ACCCGCAGGG TGATGCGGCT GGAGATCGAG GAGGCCGCGC TGGCCAAGGA GGAGGACCAG
GCGAGCAGGG CCCGCCTGGA GGAGCTGCGC AAGGAGCTCG CCGACCTGCG CGCCGAGGCC
GACGCCATGC GGGCGCAGTG GGAGGCCGAG CGGCAGGTGC TGCGCGGCGT CCAGACCCTG
CGCGAGGAGA TAGAGCGCGT GCGCACCGAG GCCGAGCGCG CCGAGCGCGA CTACGACCTC
AACCGCGCCG CCGAGCTGCG GCACGGCAAG CTGCCCGAGC TCGAACGGCG CCTGCAGGCC
GAGGAGGAAC GCCTGCTCGC CAAGCAGGGC GCCGGCCGGC TGCTGCGTGA GGTCGTGACC
GAGGAGGAGA TCGCGATGAT CGTCTCCAGG TGGACGGGCA TCCCGGTGAG CCGCCTGCAG
GAGGGGGAGC GGGAGAAGCT CCTGCACCTG GACGAGATCC TGCACGAGCG GGTGATCGGC
CAGGACGAGG CGGTGCGGCT GGTGGCCGAC GCCGTCATCA GGGCCCGCTC CGGCATCAAG
GACCCGCGCC GTCCGATCGG GTCGTTCATC TTCCTGGGAC CGACGGGCGT GGGCAAGACC
GAGCTGGCCA AGGCGCTCGC GGCGGCGTTG TTCGACACCG AGGACAACAT GATCCGCATC
GACATGAGCG AGTACCAGGA GCGTCACACG GTCAGCCGTC TGGTCGGCGC CCCTCCCGGC
TACGTCGGGT ACGACGAGGG CGGCCAGCTC ACCGAGGCGG TACGGCGCAA GCCGTACTCG
GTGGTGCTCT TCGACGAGGT GGAGAAGGCG CATCCCGACG TCTTCAACAC GCTGCTGCAG
GTCCTGGACG ACGGGCGGCT CACCGACGCG CAGGGCAGGA CCGTCGACTT CCGGAACACC
GTCCTGATCA TGACGTCCAA CATCGGCTCG ATCTACCTGC TCGAAGGCGT CACGCCGAGC
GGGGAGATCA AGCACGACGT GCAGGAGCAG GTCATGGCGG AGCTGCGCTC GCACTTCCGT
CCCGAGTTCC TCAACCGCGT CGACGACATC GTGATCTTCA AGCCGCTCAC GCCGCAGGAG
ATCGAGCACA TCGTCGAGCT GATGTTCGGG GAGCTGCGGG CGCGGCTCGA CGAGCGGGGG
ATAGGGCTGG AGGTGTCCGA AGACGCGCGC AGGTACATCG CCGAGCGGGG ATACGACCCG
GTGTACGGCG CGCGCCCGCT GCGCCGGTTC ATCGCCAGGG AGGTCGAGAC CCGCATCGGC
CGTGCGCTGC TCACCGGTGA CGTGCACGAG GGCGCCGTGG TCCGGGTCGG CCTGGCCGAA
GGCGAGCTCG TCGTCACCTA CGAGTGA
 
Protein sequence
MDVNQLTQKS QEALHDAQTK ALRFGHTEID GEHLLLALLD QPDGLIPRLL TKADVDLDRL 
VADLEAELSR RPKVSGPGVD PGQVRVTQRL SRLLETAKRE ADRLKDDYVS VEHLLVALLE
EGSETSAGRL LRQQGLSRDA FLRVLTEIRG NQRVTSAMPE VAYEALAKYG RDLVADAAAG
KLDPVIGRDS EIRRVIQILS RKSKNNPVLV GDPGVGKTAI VEGLAQRINN GDVPDGLKDK
TVFSLDMGAL VAGAKYRGEF EERLKAVLTE VVAAEGRILL FVDELHTVVG AGAAEGAMDA
GNMLKPMLAR GELHMIGATT LEEYRRHIEK DAALERRFQP VMVDEPSVED AISILRGLRE
RLEVFHGVTI QDGALVAAVV LSHRYISDRF LPDKAIDLVD EACAMLRTEI DSMPAELDEL
TRRVMRLEIE EAALAKEEDQ ASRARLEELR KELADLRAEA DAMRAQWEAE RQVLRGVQTL
REEIERVRTE AERAERDYDL NRAAELRHGK LPELERRLQA EEERLLAKQG AGRLLREVVT
EEEIAMIVSR WTGIPVSRLQ EGEREKLLHL DEILHERVIG QDEAVRLVAD AVIRARSGIK
DPRRPIGSFI FLGPTGVGKT ELAKALAAAL FDTEDNMIRI DMSEYQERHT VSRLVGAPPG
YVGYDEGGQL TEAVRRKPYS VVLFDEVEKA HPDVFNTLLQ VLDDGRLTDA QGRTVDFRNT
VLIMTSNIGS IYLLEGVTPS GEIKHDVQEQ VMAELRSHFR PEFLNRVDDI VIFKPLTPQE
IEHIVELMFG ELRARLDERG IGLEVSEDAR RYIAERGYDP VYGARPLRRF IAREVETRIG
RALLTGDVHE GAVVRVGLAE GELVVTYE