| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3957 |
|---|
| Symbol | |
|---|
| ID | 8667247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4406018 |
|---|
| End bp | 4407115 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | sugar transport system (permease) |
|---|
| Protein accession | YP_003339610 |
|---|
| Protein GI | 271965414 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.225692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0349833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGAA CCACGGTCGG GACAGGCCGG CGCGCGCGCC GCCGTACCGG CGTGAACAGG
GAGAACGTCG CCGGCTGGCT CTTCGTGGCG CCGGTGGTGG CGATCCTCGG CCTGTTCCTG
CTGCTGCCGA TCCTGATGGC CCTCTGGGTG AGCCTGACGG ACTGGAACGG GCAGGGCAGC
CCGTTCCGCG CCGGGGTGCC GTTCGTCGGG CTGGACAACT ACACGGGGCT GTTCGCCAGG
GACGACCTGA GCCGCCAGAA CTTCATGATC AGCATCCGCA ACACCTTCTA CTACGTGATG
ATCGTCGTGC CCGCGCAGAC GGTGCTGGCG CTCGGCCTGG CCCTGGTGGT GCACCGCCGG
ACGCTCAGGG GCAAGGCGTT CTTCCGCACC GCCTTCTACT TCCCGTCGGT GACCAGCTCG
GTGGCGATCA GCGTCCTGTT CCTGTTCGTC TTCAGCGACT CCGGCGCGGT CACCCAGCTT
CTGGCGATCA TCGGCGTCGA GGGTCCGCAG TGGTTCTCCG ACTCGCGTGG CCTGCTGCAC
CTGCTCCTGA GCGCCCTCGG CCTGGCCGAC GTGGACGCGC CACCCCCGGT GCTGACCGGC
GGCGGCCCGT TCGGGCTGTC GTGGTGGGAG TGGTTGTCGG GCCCCAGCGT GGCCATGTGC
ACGATCATCA TGCTGGCCGT CTGGACCACC TCCGGCACGT TCATGCTGAT GTTCCTCGCC
GCCCTGCAGG ACATTCCGGT GGCGCTGGAG GAGGCGAGCA TGCTGGACGG CGCCGGCCGC
CGGCAGCGCC TGCGGCACGT GACGCTGCCG GTGCTCAGGC CGACGCTGTT CCTCGTGCTC
ACCCTCGGGC TGATCGCCAC CTGGCAGGTT TTCGACCAGG TGTACGTGAT GAGCCAGGGC
GGCCCGGCGA AGACCACGCT GACCCCGGCC TACCTGTCCT ACCGGACCGC CTTCCGCGAC
TTCGACTACG GCTCGGGAGC GGCGATTTCG TTCGTCCTGT TCCTGCTCAT CGTGCTGCCG
GCGGTGCTCC GGCGGTGGGT GACGCGCGGC CGCGACGCGG TCCGCGACCG CCGCCGGCCG
CGCCCGGGAA GATCATGA
|
|---|
| Protein sequence | MAGTTVGTGR RARRRTGVNR ENVAGWLFVA PVVAILGLFL LLPILMALWV SLTDWNGQGS
PFRAGVPFVG LDNYTGLFAR DDLSRQNFMI SIRNTFYYVM IVVPAQTVLA LGLALVVHRR
TLRGKAFFRT AFYFPSVTSS VAISVLFLFV FSDSGAVTQL LAIIGVEGPQ WFSDSRGLLH
LLLSALGLAD VDAPPPVLTG GGPFGLSWWE WLSGPSVAMC TIIMLAVWTT SGTFMLMFLA
ALQDIPVALE EASMLDGAGR RQRLRHVTLP VLRPTLFLVL TLGLIATWQV FDQVYVMSQG
GPAKTTLTPA YLSYRTAFRD FDYGSGAAIS FVLFLLIVLP AVLRRWVTRG RDAVRDRRRP
RPGRS
|
|---|
| |