Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3954 |
Symbol | |
ID | 8667244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4400383 |
End bp | 4402146 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | Serine/threonine protein kinase-like protein |
Protein accession | YP_003339607 |
Protein GI | 271965411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.214407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0109632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGACGC CGAACCCCCT CACATCCGTT GATCCCCGGC AGATCAGCCG ATACCGGCTG ATCGGTCGGC TGGGTGCCGG GGGGCAGGGC GTGGTCTACC TCGCCGAGGA CCCCGCGGGC ACGGCCGTGG CGATCAAGGT CCTGCACGCG ATCGCCACGG CGGACCCCGA GCTCCACGCG CGCTTCGCCG CCGAGCTCGC GGCGGTCCAG CGGGTCGGCC CGCTCTGCGC GGCCCGGATC CTGGACGCCG ACCTGGACGC ACCCAGGCCG TACATCGTCA GCGAATACGT CGACGGTCCC AGCCTGCGCG CGGCGGTCGC CGAGCGGGGG CCGCTCGACG CCGACGCCGT ACACCGGCTG GCGACGAACA CCGCCACCGC CCTGGCCGCG ATCCACGGCG CGGGGATCGT GCACCGCGAT CTCAAGCCGG ACAACGTGCT CCTCGGTCCC GACGGCCCGC GCCTCATCGA CTTCGGCGTC GCCCGTACGG TGGGCATGAC GATGACCGGG TCCGGCCAGA TGCTGGGCAC GCCGATGTAC ATGGCGCCGG AGATCTTCAA GGGCGAGCGG GCGGGCCCCG CGGCGGACGT CTTCGCCTGG GGCGCGGTCC TCGTCTACGC CGCGACCGGG CGGGCCGCGT TCGAGGCGGC CGAACCCGCC GCGGCCATGC ATCGCGTCCT GGCCCTCGAA CCCGATCTCA GCGGGCTCCC CAGCCGGCTC GGCCCGCTCG TGGCACGCGC CCTGGCGAAG GACCCCTCCC ATCGTCCCGC GGCGATCGAG CTGCTCCACT CCCTGATCGG GGCGACCGGC CCGCTCCCCG CAGCCCCCCT CTCGCCCGGC GATCCCTCCG TCGGCCCGCC CGGTCCGGCG AGCCCGCTCG GTCCGTCCGG CGGCCCGGCC GGTGCCTCCG GGGCCACGGT GCCGCCGTCG AGCCGGGGCG GGGGCGCGCG GCGGCGCCGG GCCGTCTCCG TCGTGGCAGC GCTCGCGCTG GCGGCGGGCG GGCTCGCGCT GGGCCTTTCG CGGTGGGCGG GATCCGATCC CGGGGCGGGG CAGGCGCGCC CTCCCCTGAG CATGGCGGTC ACCGCGGTCT CCTCCGCCTC TCCCCGGCAG GCATCCCCCG AGGCGGTCTC CTCCCCGCCC GTGCCGAAAA AGCACAGGCC CCCCGCCCCC GCCACGGAGC CGGCCTCCCG GACGACCGGG CACCCGCCGT CTCCGACGCC GACCGTGAAG GTCTCCCGGC AGGCCCGGCC GGACCGGACC CCCACAGTCG ATCCGGAGCC GGAGGCCGAA CCCGGGCACG ATGAGACCCC GGAGCCGTTC CCGCGTGAGG CCGACGTGGT CCTGAGCAAC CCCCTCGGAC CGGACAGCAG GTGCAGCGAC CCCCAGGACG GCCCCTCCGG CCTGCAGTTC CGCTCGTGCA TCAGGGTCAC CGCGGGACAG GTGCTGTTCA GCGTCAGACT GACCAACCCC GCCCCGAAGC CGTACGGCGC GGCCGTCCGG GTCTCCTGGT GGAGTGACGG GCGCACCCAC GGATGCCTGC CCGACCCCGG CCCCTGGCGT GTCAAGGTGC CCGCCCGCGG GGTGACGGTC ACCCCCGAGG GCCGGTGCGC GGCCGAGCGG ACCGCCCGGC CGCTGGCCTA CCAGACCGAG GTCACCGTCG GGTCGTCCGG CATGGACGAC TGGTCGCAGC GCAAGTTGTC GCCGGTCGCC CATGTGTACC CCGACCACAC GAAATTCACC TGCCTGGGCA AGCAGGCCTG CTGA
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Protein sequence | MRTPNPLTSV DPRQISRYRL IGRLGAGGQG VVYLAEDPAG TAVAIKVLHA IATADPELHA RFAAELAAVQ RVGPLCAARI LDADLDAPRP YIVSEYVDGP SLRAAVAERG PLDADAVHRL ATNTATALAA IHGAGIVHRD LKPDNVLLGP DGPRLIDFGV ARTVGMTMTG SGQMLGTPMY MAPEIFKGER AGPAADVFAW GAVLVYAATG RAAFEAAEPA AAMHRVLALE PDLSGLPSRL GPLVARALAK DPSHRPAAIE LLHSLIGATG PLPAAPLSPG DPSVGPPGPA SPLGPSGGPA GASGATVPPS SRGGGARRRR AVSVVAALAL AAGGLALGLS RWAGSDPGAG QARPPLSMAV TAVSSASPRQ ASPEAVSSPP VPKKHRPPAP ATEPASRTTG HPPSPTPTVK VSRQARPDRT PTVDPEPEAE PGHDETPEPF PREADVVLSN PLGPDSRCSD PQDGPSGLQF RSCIRVTAGQ VLFSVRLTNP APKPYGAAVR VSWWSDGRTH GCLPDPGPWR VKVPARGVTV TPEGRCAAER TARPLAYQTE VTVGSSGMDD WSQRKLSPVA HVYPDHTKFT CLGKQAC
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