Gene Sros_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3946 
Symbol 
ID8667236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4391432 
End bp4392382 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339600 
Protein GI271965404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000987036 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0193304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA CCACCGCCGC CGGGTACGTC ACCCGGCGGC CTCTGGCCGA AGACGCCCGC 
GACGTCCACG AGCTGATCTC CCTGTGTGAC ACCCAGGTGA TCGGCAAGGC GGACATGACC
CTCGACGACG TCGCCGACCA GCTGAACGAC CCCTCCTTCG ACAGGGAGAG CGACGGCTGG
CTCGTCCACG ACGCGGCCGG CCGCCTGGTC GCCTGGGCCT GGGCCTGCCG CAAGGGCACC
AGCGACAACG TGGACATCGA CGTGGTCGTG CACCCCGACG CCCCCGGGCT CACCGGCCGG
CTCTGGGACA CCGTGACCGA ACGGGCCGGG CAGATCGCCG CCGCGCTCGG CCACGACAGG
GCCGTGCTGG ACATCGGCCT GTACCGGGAG GACAGCGGCA AGCGCGCCAT CGCCTCCGCC
CGCGGGTTCA GCGCGGCGAC CAGCTTCATC CGGCTCCTCG TCGACCACGG GACCTCGGTG
CCCGGACCCG ACCTTCCGCC CGGCCTCACG GTCCACCAGG GGCTCACCGA GGAGGTCCGC
CGCCAGGGGC ACGCCGTCCA CCAGGCCGGC TTCGCCGAGC ACTTCGGGTT CACCCCCAAG
GACTACGACG AGTGGTACGG AGAGCTGGAC TCCTCGGCCA GCAGCGACTG GTCGCAGCTG
GCGGTCGCCC GGATCGACGG CGAGCCGGCG GCGATGCTGC TGGGCACCAA CGCCTTCGCC
GGGGACGAGA ACTGCGGCTA CGTGCGCCAG CTCGCCGTAC TGCCGGCCTT CCGGGGGCGC
GGCCTCGGCC GTCTCATGCT CCGCAGGGCC TTCGCGGACG ACGCCCGGCG CGGCCGGGTG
GGCACCTACC TGCACGTGGA CGCCAACAAC AGCACGCCCG CCCTGGACCT GTACCTGTCG
GTGGGCATGC GCCAGGTGCT GGCCATCGAC GTGTGGCGGC GGACGGTCTG A
 
Protein sequence
METTTAAGYV TRRPLAEDAR DVHELISLCD TQVIGKADMT LDDVADQLND PSFDRESDGW 
LVHDAAGRLV AWAWACRKGT SDNVDIDVVV HPDAPGLTGR LWDTVTERAG QIAAALGHDR
AVLDIGLYRE DSGKRAIASA RGFSAATSFI RLLVDHGTSV PGPDLPPGLT VHQGLTEEVR
RQGHAVHQAG FAEHFGFTPK DYDEWYGELD SSASSDWSQL AVARIDGEPA AMLLGTNAFA
GDENCGYVRQ LAVLPAFRGR GLGRLMLRRA FADDARRGRV GTYLHVDANN STPALDLYLS
VGMRQVLAID VWRRTV