Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3945 |
Symbol | |
ID | 8667235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4389794 |
End bp | 4391380 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_003339599 |
Protein GI | 271965403 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00181565 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00620132 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGGAGA CCGCAGCCGC ACCGGCGCGG CGGCGCGAGG TCATGGTGGT GCTGCCGGGC CTGATGCTCG CGATGGTCCT GGCCATGCTC GACAACATGA TCGTCGGCAC CGCGATGCCG CGCATCGTCG GGGAACTGGG CGGGCTGACC CACCTGTCCT GGGTGGTGAC GGCCTACGTG CTCGGCACCA CCGTCTCCAC CCCCATCTGG GGGAAGATCG GCGATCTGTA CGGCAGGAAG AACATCTTCC TCTGGTCCAT CGTCATCTTC ATGATCGGCT CCGTGCTCTG CGGCATGGCC GGATCCGAGA TGCTGGGCGG TCCCACCGAC GGCATGGCCC AGCTCATCGC CTTCCGCGCG CTCCAGGGCC TCGGCGCCGG CGGCCTGATG GTCAACGCGA TGGCGATCAT CGGTGACCTC GTCCCGCCCC GCGAGCGCGG GCAGTACCAG GGCATCATGG CGGGCGTGAT GTCGCTGGCG ATGATCGCCG GCCCGCTCGT CGGCGGGTTC ATCACCGACC ACCTCGACTG GCGCTGGGCC TTCTACGTGA ACCTGCCCGT CGGGTTCGTC GCGCTGGCGC TGCTGGCGGC CAAGCTGAAG CTGCCCAAGT ACCGCACCGA GCACCGCATC GACTGGCTCG GCGCGATCCT GCTCTCCGTC GGCATCACCG CGCTGGTGCT CATCACCACC TGGGGCGGCA ACGACTACGG ATGGGGCTCG CCGCAGATCC TCGGCCTGGC CGCGCTCGCG ATCGTCACGC TGGCGCTGTT CATCCCGGTG GAGCGCCGGG CCGTCGAGCC GATCATGCCG CTCCAGCTGT TCCGCAACCG CAACTTCACG CTGATCTCGC TGGTCGGCTT CCTGCTCGGC TTCGCGATGT TCGGCGCCAT CAACTTCCTG CCGCTGTTCC AGCAGACGGT CCAGGGCGCC TCGGCCACCA ACTCGGGCCT GCTGCTGCTG CCGATGATGG GCTCGGCCAT GGTGATCTCA CTCTTCGTCG GCCAGGCCAT CACCAAGACC GGCAAGTACA AGCTCTACCC GGTCCTCGGC GGCGTGATCA TGGCGGTCGC CATGTGGCTG CTCTCCCTGA TGGACGTCAA CACACCCTCC TGGCAGACCG GCGTGTTCAT CGCGGTGCTC GGCCTCGGCA TGGGCTTCCT GATGCAGACC ACCATGCTGA TCGCGCAGAA CAGCGTGGAG CAGAAGGACC TGGGTGTCTC CAGCAGCACC TCCACCTTCT TCCGCTCCAT CGGCGGCTCG TTCGGCGTCT CGCTGTTCGG CGCGGTCTTC AACAACCAGC TCGCCTCCAA CCTGGAGAGC AAGCTGGGGC CCGTCGGCGA CAAGCTCGCC TCCAGTGGCG GCCAGTTCAA CCCGGCCGCC CTGCACGAAC TGCCCGCCAA CGTGCGGACC GGTTTCCTGG AGTCGCTGGC CACGTCCATC TCCAGCGTGT TCTGGTGGGC GATCCTGTTC GCCGTCCTGG TGCCGCTGCT GGCCGCCTTC ATCAAGGAGA TCCCGCTGCG CGGGGGCCCC GAGCAGACCG GCGACGCCGA GAACCCGGCC CCGGTGCCGG CCCCGGCCCT CGACTGA
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Protein sequence | MKETAAAPAR RREVMVVLPG LMLAMVLAML DNMIVGTAMP RIVGELGGLT HLSWVVTAYV LGTTVSTPIW GKIGDLYGRK NIFLWSIVIF MIGSVLCGMA GSEMLGGPTD GMAQLIAFRA LQGLGAGGLM VNAMAIIGDL VPPRERGQYQ GIMAGVMSLA MIAGPLVGGF ITDHLDWRWA FYVNLPVGFV ALALLAAKLK LPKYRTEHRI DWLGAILLSV GITALVLITT WGGNDYGWGS PQILGLAALA IVTLALFIPV ERRAVEPIMP LQLFRNRNFT LISLVGFLLG FAMFGAINFL PLFQQTVQGA SATNSGLLLL PMMGSAMVIS LFVGQAITKT GKYKLYPVLG GVIMAVAMWL LSLMDVNTPS WQTGVFIAVL GLGMGFLMQT TMLIAQNSVE QKDLGVSSST STFFRSIGGS FGVSLFGAVF NNQLASNLES KLGPVGDKLA SSGGQFNPAA LHELPANVRT GFLESLATSI SSVFWWAILF AVLVPLLAAF IKEIPLRGGP EQTGDAENPA PVPAPALD
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