| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3888 |
|---|
| Symbol | |
|---|
| ID | 8667178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4333333 |
|---|
| End bp | 4334136 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003339548 |
|---|
| Protein GI | 271965352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0248897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGACA AGCCGAGTGA GCGGAACGCC GGCATCGACA CGACCCGGCC CAGCATCGCC
AGGGCCTACG ACGTCGTCCT CAACGGCAAG GACAACTTCG AGGTCGACCG AGCCTTCGTC
GCCGAGATCG TGAAGGTCAT CCCCGAGATC TACGACGTGG CGGCCTACAA CCGGCAGATC
CTCGGCCGGG GGGTGCGCTT CCTGTCCGGC CAGGGCATCA CCCAGTTCGT CGACCTCGGC
TCGGGGCTGC CGACGGAGGA GAACACCCAC CAGGTCGCGC AGCGCGCCAA CCCGGAGTCG
CGGGTCGTCT ACGTCGACAA CGACCCGATG GTGCTGGCCC ACGGCCGGGC GCTGCTGGCG
GAGAACGACC GCACGGCGGT CATCACCTCC GACCTGCGCG ACACCGAGGC CATCCTCTCC
GACCCCGCCT TCAAGAGCCT CATCGACCTC GGCCGCCCGG TGGCCGTGAT GCTGGTCGGC
ATCCTGCACC ACCTGCACGA CGACGAGGAC CCCCGGGCGA TCGTCGAGGC CTACATGGCG
GCGGTCCCAT CAGGCAGCTA CCTGTTCATC ACCCACTTCT GCGCCTCCAC CCAGGAATCG
CGCGACGCCG AGCAGAAGTA CCTCGCGCTG CTGGGCACCG GCCGGTTCCG CACGCCGGAG
GAGATCACCG CCTTCTTCGA CGGGTTCGAG CTCCTCGAAC CGGGCGTCGT CCCCCTGCCC
CTGTGGCGGC CCGACGGTCC CGTCCCCGGG AAGCTCACGG TGGGCCAGCA GCTGATGTAC
GGCGGGATCG CCTACAAGCG GTAG
|
|---|
| Protein sequence | MADKPSERNA GIDTTRPSIA RAYDVVLNGK DNFEVDRAFV AEIVKVIPEI YDVAAYNRQI
LGRGVRFLSG QGITQFVDLG SGLPTEENTH QVAQRANPES RVVYVDNDPM VLAHGRALLA
ENDRTAVITS DLRDTEAILS DPAFKSLIDL GRPVAVMLVG ILHHLHDDED PRAIVEAYMA
AVPSGSYLFI THFCASTQES RDAEQKYLAL LGTGRFRTPE EITAFFDGFE LLEPGVVPLP
LWRPDGPVPG KLTVGQQLMY GGIAYKR
|
|---|
| |