| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3885 |
|---|
| Symbol | |
|---|
| ID | 8667175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4325799 |
|---|
| End bp | 4329791 |
|---|
| Gene Length | 3993 bp |
|---|
| Protein Length | 1330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003339545 |
|---|
| Protein GI | 271965349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0169004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCTGTC ACAGCGAACC GGAGACGGGG CAGGACGCGC GGCGATCCGC CCGCCACGGC
GGGGAGGCCG ATCCCCGGCG GGCGGTCGCC GCGCTGGCCT CCTCCGCCCG GCCGTACCTG
CTGGGAGTGC GCCACCACAG TCCCGCGCTG GCCGTGGTCC TGCCCGCGCT GCTGGACGCC
GCCGACGCCG AAGTGGTCTG TGTCGAGCTG CCGGCGGACT TCCAGCCGTG GCTGGCGCAC
CTGGCCGACC CGGGAACCCT CGCGCCGGTC GCCCTCGCCG GGGCCGACGG GGAGGGGAGG
CTGGGCTTCT ACCCGTTCGC CGACTTCTCC CCGGAGCTGG TGGCGATCCG CTGGGCCCGG
CAGCGCGGAG CGGAGGTGCT CTGCTGTGAC CTCCCGCTGT CCGACCCCGG CTGGCACGCG
CCCGGCACGG CGCAGGCGTC CGATACGGCG CAGGCGTCCG ACGCTGGTAC GGCGCAGGCG
CCCGGCACGG TACGGTCCCC GGATCCGGCT CGGCCGATGG GCCCGGACGC GGTTCCGGTT
CCGGCAGGCG CGGCGGCCTC GCGGGGAACG TCCTTCGCCG CCGCGCTGGC CGCCTCGGGC
ACCGGCCGCG AGGGAGACGA CATGTGGGAC CGGGCCGTGG AGGTCCTCGC TCCCGGATGC
GAGCCCGAAG CGGTGCGCCG CGCCGCCCTC GGCGTCGGCT GGGCACTGCG CCGGGACGCC
GAGGCCGCGG GCGGCGTGCC GGCCGTGGAC ATGGCGCGTG AGGCGCACAT GCGCCGTGTC
CTCGAGGACG CCGCGGCGGG CGGCCGGCGC GTCGCGGCGG TGGTCGGCGC CTTCCACGCT
CCCGCGCTGA TCATCCCTGA CACCGCCGAG CCGGGGCGGA CCGGCGCGGA CGGCGCCGCC
CCGCCGCCTG GTACGGCAGG CGGCCAGGCG ACATCCGGCC GGCCGGCCAC GGACGGCGAG
GTCGTCCCCC CTCCGGCCAC GGATGGTGCG GTCGCCGCCC TTCCGGCCAT GGACGGCGAG
GTCGTCCTCC CTCCGGCCAC GGATGGTGCG GTCGCCGCCC CTCCGGCTGT CCCGTCCGCG
CGCGCCGGCT CGCCGGCCGC CACCTCGCTC GTCCCCTACG CTTTCGACCT GCTCGACTCG
CGATCCGGTT ACCCGGCGGG GATCCGCGAC CCCCGTTGGC AGCAGACGGT GTTCATGGCC
GGTGGCGACC CCGGCCGCGT CAGGGACGGC GCCGCCCGCG CGATCACCGG CCTGTGCCGG
GAGCTCCGCT CCGCCGGGCA CACCGCGGGC ACCGGAGAGG CCGTCGAGGC GCTGCGGCTC
GCCTGCGATC TGGCGCGGCT GCGCGGCCTG CCCTCGCCGG GACGGGGGGA GCTGCTGGAA
GCGGTGACGA CCGTGCTCGG CCAGGGCGAG CCCCTGGGCC GGGGGCGGGC CCTCGCCCGG
GCCCTCGACG CGGTGTTCGT CGGCACCGAC CGTGGCCGGA TCGCGCCCGG CACGCCGCGT
TCGGGACTCG GCCCCGCCGT CGAGGCCGAT CTCGCCGCGC TCCGGCTCCC GTGCCCCGAC
AACCCCGAAC GACGTGAAGT ACGCCTGGAC CCGCTCCGTT CCGATCTGGA CGCGCGCCGG
GAGGTCGCGC TGCAACGCCT GCTGCTCTGC GGCGTCGGCT ACGGCGAGCC GATCGAGGTG
ACCGGAACGG GTGACTCCAC CGCGCTCACC ACCAGGTGGC GGCTCTCCTG GACTCCCGCG
GTCCCGGCAC TGCTCGACCT GGCGGGCGTC CGCGGTGTCA CCCTTGCCCA GGCCGCGGCC
GGCACGCTGC GCGAGACCTT CCGCCGAGAG TCCGCCGAAG GAGGGCCCAC CTGCGGCCTG
ATCCTCAGCG GCCTCCGCGC CGCGGCCCGC TGCGACCTGC CGGAGCTGGT CGCCGACCGC
CTCGCCGACG CCGCCGTCGC GCTTCCCGCC ACCGCCACGC TCGCCGAACT GCTCGATGCT
CTCGACCTGC TTGAGGCGCT GCGCCGCGAA CACCTTCCCG GCACCACGCC GGAGGGCCGC
GAGCAGGCCG CCGAGCTGGC CGGCACCCTG CTGGAGGCCG CGGTCCGCGC GCTGCCGGGC
CTGGCCGGCA GCGACCAGCC GCAGGACGCG GCCGCCCTGG TCGCCCTCGC CACCCGGGCC
GGTGAAGAGC GCCTCGGGCT GCGGATGGAC GACACCCTGG CCGCGCTCAC GGGCACCGCC
TCCCCCCTCA TCCAGGGCGC GGCCCTGGCC GCCCGGGTCC TGCTCGACCT GGACGGCCCC
GGCACTCTGG GAGCCCGGGC CGCCGGATGG GTCGGCGCCG CCACCGGACC GGACGGCCGC
CATCGCCTGA GCCGCCTGCT GACCGGCGTG CTCACGGCCG CCGGACCGCT CCTCCAGTCG
GCGCCGGCGG CCCTCGATCC GCTCATGGAC CGCATCGACG GCCTCGCCGA CAGGGACTTC
CTCGACCGGC TGCCGGCGCT GCGCGGGGGG TTCGACACCC TCACCCCCGC CGGCCGTACC
CGGCTGCTGG GGGCCGTGTC CGAGCGCCTC GGAGACAGGC TCGACCTGAC GCTGAGCGCT
CCGCCCGGGC TGCTCGCCCT GTGGAGCGCC GCCGACGCCG CCGGGCTGGC CGCGCTGCAC
GCGCTCCGGC TCCCCGTCCC GGCGTCCGCT CCCGCCCTGG CCGGCACGCC ATCCGACGCG
CCGGAGCCAC CCGCGCCGGA CCGCCGACCC GCACGGGACG GCGAGGAGGT GGAGGACACG
CAAGAGCCTC CGTCACCGGA GGCGGGCGCG GTGACGGAGG ATCCGCGGAC GCCGGCGCGG
CCGGAGACGG CCGAGGTGAC GGAGGCGGGG CCCGGCGCCC GGCGGAGGTT CACGCCGGCC
GACCGGTGGC GGCTGCTGCT CGGCCGGGAG TCCGAGCGGC TCCCGGCGGG CGCCCGCTCC
TACGCGCGCG CGTTGGACGA GCTGTACGGA ACGGGACGGG GTGAAGGCGC GGGCCACTTC
GGGCAGAGCC CCGGGGAAGG GGGCGACTCC GGCGGCCGGG GAGACTCCTT CCCCACCGCT
CGCGAGTGGG CCGAGGAACT GGAGGTCCTT TTCGGGACCG AGGTGCGAGA GGAGGTGCTG
GCCCGGGCCG CCGACGCCGG ACGGACCGAC GTGCTCACCG AACTCGATCC GGCCGCGGTA
CGGCCATCCG TCGAGCTGCT GACCTCCGTG CTGACCCTGG CTGGAGGCCT GCCCGAGCAG
CGGCTCGCCA AGCTCCGGCC ACTCGTGCGC CGTCTGGTCG CCGAACTCAC CCGGGAGCTC
GCTACCCGGC TGCGGCCCGC CCTGACCGGG CTGGCGACGC CGCGTCCGAC CCGCCGCCCG
GGCGGCCGGA TCGACCTGCC GCGCACCCTG CGGGCCAACC TGCAGCACAC GCGTCGCATG
GGCGACGGCC GGCTCGTGGT CGTCCCGGAG CGACCGGTGT TCAGCACCCG TGCCCGCCGG
GAGGCCGACT GGCGGCTGAT CCTCGTGGTC GACGTGTCCG GCTCGATGGA GGCCTCGGTG
GTCTGGTCCG CGCTGACCGC CGCGGTGCTG GCGGGCGTGC CGACGCTCTC CACCCACTTC
CTGTCGTTCT CCACAGAGGT GATCGACCTG ACGGACCGGG TCGCCGACCC GCTCTCCCTG
CTGCTCGAAG TGCGGGTCGG CGGTGGGACG CACATCGCCG CGGGGCTCGC CCACGCCCGC
TCGCTGGTCA CCGTGCCGAG CCGCACGCTT GTCGTGGTCG TCAGCGACTT CGAGGAGGGC
TACCCGATCG GAGGCCTGCT CGGCGAGGTC CGCTCCCTCG CCGGGTCCGG CGTCCACCTG
ATGGGGTGTG CCGCCCTGGA CGACAGCGGC GTTCCCCGCT ACTCGCTCCC CGTCGCCCAG
CAGCTCGTCG CGGCCGGCAT GCCCGTCGCC GCCCTCAGCC CGCTCGCCCT CGCCCGATGG
GTGGGCGACC GCCTTCGCGG AGAGTCCCGG TGA
|
|---|
| Protein sequence | MTCHSEPETG QDARRSARHG GEADPRRAVA ALASSARPYL LGVRHHSPAL AVVLPALLDA
ADAEVVCVEL PADFQPWLAH LADPGTLAPV ALAGADGEGR LGFYPFADFS PELVAIRWAR
QRGAEVLCCD LPLSDPGWHA PGTAQASDTA QASDAGTAQA PGTVRSPDPA RPMGPDAVPV
PAGAAASRGT SFAAALAASG TGREGDDMWD RAVEVLAPGC EPEAVRRAAL GVGWALRRDA
EAAGGVPAVD MAREAHMRRV LEDAAAGGRR VAAVVGAFHA PALIIPDTAE PGRTGADGAA
PPPGTAGGQA TSGRPATDGE VVPPPATDGA VAALPAMDGE VVLPPATDGA VAAPPAVPSA
RAGSPAATSL VPYAFDLLDS RSGYPAGIRD PRWQQTVFMA GGDPGRVRDG AARAITGLCR
ELRSAGHTAG TGEAVEALRL ACDLARLRGL PSPGRGELLE AVTTVLGQGE PLGRGRALAR
ALDAVFVGTD RGRIAPGTPR SGLGPAVEAD LAALRLPCPD NPERREVRLD PLRSDLDARR
EVALQRLLLC GVGYGEPIEV TGTGDSTALT TRWRLSWTPA VPALLDLAGV RGVTLAQAAA
GTLRETFRRE SAEGGPTCGL ILSGLRAAAR CDLPELVADR LADAAVALPA TATLAELLDA
LDLLEALRRE HLPGTTPEGR EQAAELAGTL LEAAVRALPG LAGSDQPQDA AALVALATRA
GEERLGLRMD DTLAALTGTA SPLIQGAALA ARVLLDLDGP GTLGARAAGW VGAATGPDGR
HRLSRLLTGV LTAAGPLLQS APAALDPLMD RIDGLADRDF LDRLPALRGG FDTLTPAGRT
RLLGAVSERL GDRLDLTLSA PPGLLALWSA ADAAGLAALH ALRLPVPASA PALAGTPSDA
PEPPAPDRRP ARDGEEVEDT QEPPSPEAGA VTEDPRTPAR PETAEVTEAG PGARRRFTPA
DRWRLLLGRE SERLPAGARS YARALDELYG TGRGEGAGHF GQSPGEGGDS GGRGDSFPTA
REWAEELEVL FGTEVREEVL ARAADAGRTD VLTELDPAAV RPSVELLTSV LTLAGGLPEQ
RLAKLRPLVR RLVAELTREL ATRLRPALTG LATPRPTRRP GGRIDLPRTL RANLQHTRRM
GDGRLVVVPE RPVFSTRARR EADWRLILVV DVSGSMEASV VWSALTAAVL AGVPTLSTHF
LSFSTEVIDL TDRVADPLSL LLEVRVGGGT HIAAGLAHAR SLVTVPSRTL VVVVSDFEEG
YPIGGLLGEV RSLAGSGVHL MGCAALDDSG VPRYSLPVAQ QLVAAGMPVA ALSPLALARW
VGDRLRGESR
|
|---|
| |