Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3734 |
Symbol | |
ID | 8667024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4144770 |
End bp | 4146263 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003339400 |
Protein GI | 271965204 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.065853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00202838 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCGAGTCA ACCGGGCATG GCTGGGACTA GTCGTCCTCG TGCTGCCGAC ATTGCTGGTC GCGATGGACA CGACGGCGTT GCTCCTCGCG CTCCCACAGC TGAGCGCCGA CCTGGGGGCC ACCAACGTCC AGCAGCTGTG GATCAGTGAC AGCTACGGAT TCATGGTGGC AGGCCTGGTC ATCACGACGG GTACGCTCGG CGACCGGATC GGCCGCCGGC GGCTGCTGAT GATCGGCGGA GCGGCGTTCG CGGTGCTGTC GGTCGTGGCC GCCTTCGCGG TCAGCCCGCT GATGCTGATC GTCGCGCGTG CGTTGCTCGG CGTCGCCGGC GCGACCCTGG TGCCGTCCAC ACTTGCCTTG ATCACCAACA TGTTCCGCGA CGAACGGCAG CGCGGGCAGG CCATCGCGAT CTGGGCGACC TGCCAGTTCA CCGGCGGCGC GCTCGGACCG GTACTCGCCG GATCCCTGCT CCAGCACTTC TGGTGGGGAT CGGTGTTCCT GGTCGCCGTG CCGGCGATGG CGTTGCTGCT GCTCGCCGGG CCGGTCCTGC TGCCGGAGTT CCGCAGCGAC CAGGCCGGCC GGCTGGACCT GGCCGGCGTC GGGCTGTCGC TCGTGGCGGT GCTTTTGATG GTCTACGGCA TCAAGCAGCT GACCGTCGAG AGCATGCCGG TCGTGCCGGC GGTGGCCCTC GTCGGCGGCG CGGCCATCGG ATTTCTGTTC GTACGCCGGC AACTGCGGCT GGAGACACCG CTGCTGGACC TGCGGCTGCT CCGCAATCGC CCGTTCACGG CCGTGCTCGT CGCGCTGGCC TTCGCCGGCA TCGCCATGGC CGGTACGGGC CTGCTGGTGA CCCAGTACCT GCAGAGCGTG CTGGGCTTCT CGCCGGTCGC GTCGGCGGTG CTGTTCGCCC CCATGGGCCT GGGCGTGGCG GTCGGCACCA TGGCCGCGCC GGCGCTGGCC CGGCGGATGA AGCAGACGAC CGCGATCGCC GGCGGGCTGG TGGGGTCGGC GCTGGGCAGC CTGCTGCTGG TCGGCGTCGA CGGTGCGCGC GCCCTGCCGC TGGTGATGGT CGGCATCGCC GTACTGGCAC TGGGCACCGG CCCGCTGTTC GCGCTGGGCA CCGGGCTGGT CGTCGGGTCC GTACCGCCGG AGCGCGCCGG CTCGGCGGCG TCGATGTCGG AGACCGGTAA CTACCTCGGC GGTTCGCTCG GCTTCGCGCT GCTCGGCGTG GTGTCCGCGG TGATCTACCG CGGCCGGATG GACGGCACGT CCGACTCGCT GGCCGGCGCG GTCGCCGCCA GCCGGCACCT TCCCGCCGGT CAGGGGGCGG AACTGCTGCA CACCGCGCGG GAGGCGTTCA CCGCCGGTCT GCACGTCACC GGCGTCGTCG CCGCCGTCAT CTTCGCCGGG CTGGCCCTAC TGATCCTGAC CATGCGCCCG GCAACCCGGA CCACCCCGGC CGCACTCCCC GACTACGAGG CGACTCGCTC ATAG
|
Protein sequence | MRVNRAWLGL VVLVLPTLLV AMDTTALLLA LPQLSADLGA TNVQQLWISD SYGFMVAGLV ITTGTLGDRI GRRRLLMIGG AAFAVLSVVA AFAVSPLMLI VARALLGVAG ATLVPSTLAL ITNMFRDERQ RGQAIAIWAT CQFTGGALGP VLAGSLLQHF WWGSVFLVAV PAMALLLLAG PVLLPEFRSD QAGRLDLAGV GLSLVAVLLM VYGIKQLTVE SMPVVPAVAL VGGAAIGFLF VRRQLRLETP LLDLRLLRNR PFTAVLVALA FAGIAMAGTG LLVTQYLQSV LGFSPVASAV LFAPMGLGVA VGTMAAPALA RRMKQTTAIA GGLVGSALGS LLLVGVDGAR ALPLVMVGIA VLALGTGPLF ALGTGLVVGS VPPERAGSAA SMSETGNYLG GSLGFALLGV VSAVIYRGRM DGTSDSLAGA VAASRHLPAG QGAELLHTAR EAFTAGLHVT GVVAAVIFAG LALLILTMRP ATRTTPAALP DYEATRS
|
| |