Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3629 |
Symbol | |
ID | 8666917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4025511 |
End bp | 4027454 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | membrane protein |
Protein accession | YP_003339303 |
Protein GI | 271965107 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.716701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACCGG TCTTCCGGCG GGCCGCCGGC CGACTGACCG ACGCCGCCCC GGGCTGGCTG GTGGAGACGG TACGGCCGGC GCCGGCGGCG CTGCGCTGGG AGCCGATGCT GCGCATGGCC GTGGCCGTGA CCACCCCGCT CCTGGTGGGG CTCGCCGCCG GGCAGATCGC ACTCGGCCTG CTGCCCGCCA TGGGGGCCAT GTCCACCGCC ATGGCCGACC GGGGCGGATC CTACCGGGCC AGGATCATCC TGATGTGCGC GGCCGGTTCC GCCGGCGCGC TGGGGTACCT CACCGGCGCC CTGGCCCGCG GCCAGGGCTG GTGGACCGTC CTGGTCGTGG TGGCCGTCTC GCTGGTGTCC GCGCTGCTCA GCACCGGGGG AGGCGCGGGT TCGGCGGCAG GGCTCCAGCT GCTCGTGATG ACCGTGCTCG GCACCGGCAT ACCGCTGCCC GGACCGCCCG GCCCGCACGC GCTGATGTTC CTGCTGGGCG CGCTGTGGAC CCTCGCGCTG GCGCTAGTCC ACTGGCCGGC GCATCCCCGG GCCGCCGAGG AGGCCGCGGT CATCGCGGTC TACCGCGCCC TCTCCCGGCT GTTCGCCGAT CGCGGCCCCG GCGCCCTGAC GGCGTTCGAC ACCGCTCTCA AGAACGGCTA CGACACCGTG CTCAGCGCCC GCTCCGCGGC GGCGGGGACG GATCCCGAGC GCACCCGCCT GGTCGCCCTG CTGAACCAGG CCTCGCTGAT CCGCAACGCG CTGATCTCGC TCTGCCAGGA GGAGCGCGAG CCGCCCGGGG ATCTGGCGGC CGCCGTGGAG GAGGTCGCCG ACTCCCTCGC CGGCGGGCCG GAGCCGCACG CGCTGCGGCA CGCGTACGAC TCGCCCGCCC TGCGCGCCCT GCACTCCAGC ATGCAGGGCG CCGTCGAGCT GGCCTCCGGC GGTGACATCG CGGCCGACCA GGTGCCCTAC GAGCCGGTCG GGTACCGCCG GCGGCTCCGG GCGCTGTGGG AGAAGATGTG GTACGGGCAC CTCACCCGCG TCTACACCAT CCGGCTCTCG CTCTGCATGG GCGTCGCCGG CGCGGTGAGC GAGTTCGGCT GGTTCGAACG GTCCTACTGG GTGATGCTGA CCGTCGCGCT GGTGCTCAAG CCCGACTTCG GGTCGGTGTT CGCGCGTGCC GTGCAGCGCG CGCTCGGGAC GCTCGCGGGC ACGCTGATCG GCACCGTGGT GCTCCTCTCG GTGCCGTACG GCCCGGCGCT CCTGATCCCG ATCGCCGTCT TCGCGGCGCT CATGCCGTAC GGCATGCAAC GCAACTGGGG CCTGATGTCG GCCTTCCAGG CTCCGCTGGT CCTGCTCCTG GTGGACCTGC TGACGCGTGG CGGCCCGAGG CTGGCGGAGG TCCGGCTGGT CGACACCCTG GCCGGATGCG TGATCGTTCT CCTGCTGGGG TATCTGCCGT GGCCGGCGAG CTGGGAGGCG CCGGTCGGGC CGAGGTTCGC CGACGCGGTG TCGGCCACCG CGCACTACAT CCGGCACGCC TTCGATCCAC GCGATCCCGG CAGGGCGCTG CTCCGCCGCA AGGCCTACGA CGCCCTCGCC GACCTGCGGA CGGTCTTCCA GCGGGCGGTG ACCGAGCCGA GGGTGGTCAG CCGCCGCGTC ACCACCTGGA TGCCCGCGAT GACCGCGCTG GAACGGGTGG CCGACGTGAC CGCGGCCACG GTCGCGCGCA CCGAACACGG GGTACCGCCG CCGTCGGACG CCGCCGTCGA GGCTCTGGTG ACGTCCCTGG AGGGCATCGC GGCCGACGTA CGCGCGGGAC GGACGCCGAG AAAGCCCGAG CTCGCCGACG AGGAGACCCT GGAGCGGGTG AACTCCGCCG TCCATGGCCT GCGCGACACC GTGTCGGGGG AGCACCCTGA CGCCGGCGGC GGGGACGGCA GGGACGGAAC GTGA
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Protein sequence | MPPVFRRAAG RLTDAAPGWL VETVRPAPAA LRWEPMLRMA VAVTTPLLVG LAAGQIALGL LPAMGAMSTA MADRGGSYRA RIILMCAAGS AGALGYLTGA LARGQGWWTV LVVVAVSLVS ALLSTGGGAG SAAGLQLLVM TVLGTGIPLP GPPGPHALMF LLGALWTLAL ALVHWPAHPR AAEEAAVIAV YRALSRLFAD RGPGALTAFD TALKNGYDTV LSARSAAAGT DPERTRLVAL LNQASLIRNA LISLCQEERE PPGDLAAAVE EVADSLAGGP EPHALRHAYD SPALRALHSS MQGAVELASG GDIAADQVPY EPVGYRRRLR ALWEKMWYGH LTRVYTIRLS LCMGVAGAVS EFGWFERSYW VMLTVALVLK PDFGSVFARA VQRALGTLAG TLIGTVVLLS VPYGPALLIP IAVFAALMPY GMQRNWGLMS AFQAPLVLLL VDLLTRGGPR LAEVRLVDTL AGCVIVLLLG YLPWPASWEA PVGPRFADAV SATAHYIRHA FDPRDPGRAL LRRKAYDALA DLRTVFQRAV TEPRVVSRRV TTWMPAMTAL ERVADVTAAT VARTEHGVPP PSDAAVEALV TSLEGIAADV RAGRTPRKPE LADEETLERV NSAVHGLRDT VSGEHPDAGG GDGRDGT
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