Gene Sros_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3509 
Symbol 
ID8666797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3883932 
End bp3884924 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content74% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003339188 
Protein GI271964992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.835033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCTCC AAGTCAGAGA CCTGCGGGTG AGCTTCCCCG CCGGGACCGC GGTGGACGGG 
ATCAGCTTCG GCCTGGAGCG GGGCCGCACG CTCGGCGTCG TCGGCGAGTC CGGCTCCGGC
AAGTCGGTGT CGTCGCTGGC GATCATGGGC CTGCACCGCC AGGCCGCCGT CTCCGGCTCG
ATCGTCTTCG ACGGCGAGGA GCTGGTGGGG GCGCCCGCCT CCCGGTTCCG CGAGCTGCGC
GGACGCCGGA TGGCGATGAT CTTCCAGGAT CCGCTGTCGT CGCTGCACCC CTTCTACACC
GTCGGCGAGC AGATCGCCGA GGCCTACCGG CTGCACCTGC GCACCTCCCG CCGGGTGGCG
CGCGAGCGGG CGGTGGAGAT GCTCGCCGAG GTGGGCATCC CCGAGCCGAG GCGGCGCGCG
GGTGAGTACC CCCACCACTT CTCCGGCGGC ATGCGGCAGC GCGTGATGAT CGCGATGGCC
CTGTCCTGCG AACCGGACCT GCTCATCGCC GACGAGCCGA CCACCGCCCT GGACGTGACC
GTGCAGGCGC AGATCCTGGA GCTGATCCGG AAGATCCAGG AGGACCGCGC CGTCGCGGTC
ATGATGATCA CTCATGATCT GGGCGTCGTG GCGCGGGTCG CCGACGAGGT CCTGGTGATG
TACGGCGGCC GCACCGCCGA GCACGCCCCG GCCCGGGAGA TCTTCAAGTC CCCCCGCCAC
CCCTACACAC GGGGGTTGCT CGGCTCGGTC CTCCGGCTGA CGGCGGGCGA GGAGGAGGAC
GGGGGGCGGC TGCCGGCGAT CCCCGGCAAC CCTCCGTCGC TGCTCGCGCC GCCGCCGGGC
TGCCGGTTCC ACCCCCGCTG TGCCCGCTAC GCGGCCGCCC CCGACGACGC CTGCGTCACC
GAGGCCCCCG AGCCGCGCCC CGCCGGTCCC GGCGGCGGCG CGACCCACCG GACGGCCTGC
CATCTCATCG ACATCTCCGG AGGCCGGCGA TGA
 
Protein sequence
MILQVRDLRV SFPAGTAVDG ISFGLERGRT LGVVGESGSG KSVSSLAIMG LHRQAAVSGS 
IVFDGEELVG APASRFRELR GRRMAMIFQD PLSSLHPFYT VGEQIAEAYR LHLRTSRRVA
RERAVEMLAE VGIPEPRRRA GEYPHHFSGG MRQRVMIAMA LSCEPDLLIA DEPTTALDVT
VQAQILELIR KIQEDRAVAV MMITHDLGVV ARVADEVLVM YGGRTAEHAP AREIFKSPRH
PYTRGLLGSV LRLTAGEEED GGRLPAIPGN PPSLLAPPPG CRFHPRCARY AAAPDDACVT
EAPEPRPAGP GGGATHRTAC HLIDISGGRR