Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3479 |
Symbol | |
ID | 8666767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 3849339 |
End bp | 3849941 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003339158 |
Protein GI | 271964962 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0164262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00700912 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTCTG TCATGCGCGA CCACCGCGCC CCCCACCATG ACGCCACCGC CGCACGCTCA GACGATCATC TGACGGTGCT CGCCCTGGCC GCGCGCGGAG GAGCGCCCGC GGACGTCGAG GCCTTCACCC GCGCGGTGTA CGCCGACGTA CGCCGATTCA TCGCCTACCT GGCCGGGAGT CACTCGGCGG AGGACCTCAC CCAGGAGACG TTCCTGCGCG TTCTGGGGAG CCTGCCCAGG TTCGCCGGCC GGTCGTCGGC CCGCACCTGG CTGCTGTCCA TCGCCCGGCG GGTCGTCGTC GACCGGTTCC GTTCGGCGGC CGCTCGCCCG GTCGTCGCCG ATCTCTCCGA CTGGCAGGCC GCCGCCGAGC GATGCCAGCC CCGCGGGCTG CCGGGGCGCG AGGACGGCGT GGCCCTGGCC GACCTGCTGG CCAAGGTGCC GCGCGAACGG CGGGAGGCCT TCGTGCTCAC CCAGCTCGTG GGCCTGCCGT ACGCCGAGGC CGCCGCGATG ATCGGATGCC CGATCGGCAC GGTGCGCTCC CGGGTGGCGC GAGCCCGCAG CCAGCTGATC GAATCGCTGG AGGCCGCCGA CCGGGCCGCC TAG
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Protein sequence | MSSVMRDHRA PHHDATAARS DDHLTVLALA ARGGAPADVE AFTRAVYADV RRFIAYLAGS HSAEDLTQET FLRVLGSLPR FAGRSSARTW LLSIARRVVV DRFRSAAARP VVADLSDWQA AAERCQPRGL PGREDGVALA DLLAKVPRER REAFVLTQLV GLPYAEAAAM IGCPIGTVRS RVARARSQLI ESLEAADRAA
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