Gene Sros_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3479 
Symbol 
ID8666767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3849339 
End bp3849941 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content74% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003339158 
Protein GI271964962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0164262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00700912 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTCTG TCATGCGCGA CCACCGCGCC CCCCACCATG ACGCCACCGC CGCACGCTCA 
GACGATCATC TGACGGTGCT CGCCCTGGCC GCGCGCGGAG GAGCGCCCGC GGACGTCGAG
GCCTTCACCC GCGCGGTGTA CGCCGACGTA CGCCGATTCA TCGCCTACCT GGCCGGGAGT
CACTCGGCGG AGGACCTCAC CCAGGAGACG TTCCTGCGCG TTCTGGGGAG CCTGCCCAGG
TTCGCCGGCC GGTCGTCGGC CCGCACCTGG CTGCTGTCCA TCGCCCGGCG GGTCGTCGTC
GACCGGTTCC GTTCGGCGGC CGCTCGCCCG GTCGTCGCCG ATCTCTCCGA CTGGCAGGCC
GCCGCCGAGC GATGCCAGCC CCGCGGGCTG CCGGGGCGCG AGGACGGCGT GGCCCTGGCC
GACCTGCTGG CCAAGGTGCC GCGCGAACGG CGGGAGGCCT TCGTGCTCAC CCAGCTCGTG
GGCCTGCCGT ACGCCGAGGC CGCCGCGATG ATCGGATGCC CGATCGGCAC GGTGCGCTCC
CGGGTGGCGC GAGCCCGCAG CCAGCTGATC GAATCGCTGG AGGCCGCCGA CCGGGCCGCC
TAG
 
Protein sequence
MSSVMRDHRA PHHDATAARS DDHLTVLALA ARGGAPADVE AFTRAVYADV RRFIAYLAGS 
HSAEDLTQET FLRVLGSLPR FAGRSSARTW LLSIARRVVV DRFRSAAARP VVADLSDWQA
AAERCQPRGL PGREDGVALA DLLAKVPRER REAFVLTQLV GLPYAEAAAM IGCPIGTVRS
RVARARSQLI ESLEAADRAA