Gene Sros_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3425 
Symbol 
ID8666713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3766708 
End bp3767730 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content75% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003339105 
Protein GI271964909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.458573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.257842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAGCC GTGCCGGCCG TGACGCGGTG ACCGGCGGGG AGGCCGTGCC GGCCGTCCGG 
GAGCGGACGC CGTCCGCCAC GCTCCCCGCC GAGGACTGTT CGATCGTCAC GCGCGGGCTG
ACCAAGCGCT TCCGGAGCGG CCAGGTGGCC GTGGACGCCC TCGACCTGGC CGTGCCCCGG
GGGTCGGTCT TCGGCTTCCT CGGCCCGAAC GGCTCGGGGA AGACCACGAC CATCCGCATG
CTGCTCGGCC TGGCCGCGCC GACCGAGGGC ACCTGGGAGC TGCTCGGCAC GCCGATGCCG
GGCGGGATGG CCTCCGTGCT GTCACGCGTG GGGGCGCTGG TCGAGGGACC GGCGTTCTAC
CCCTACCTGT CGGGTGAGGC GAACCTGCGC CGCTACGACG CCGCCGACCC GGCGGCCGAC
CCGCGTACGG CCTCCGCCAG GATCGGGCTC GCCCTGGACA GGGTCGGGCT GGCCGCCGCG
GCCCGCAAAC GCTACCGGGC CTACTCGCTG GGCATGCGCC AGCGGCTGGC GATCGCTGCG
GCGCTGCTCG GGCCGAGGGA GCTGCTGATC CTCGACGAGC CGACCAACGG CCTCGACCCG
CAGGGCACCC GCGAGGTGCG GGGGCTGATC AAGGAGATCG CCGCAGGGGG GACGACCGTG
TTCGTCTCCT CCCACCTGCT GGCCGAGGTG GAGCAGATGT GCTCTCACAT CGCCGTCATG
CGGACCGGGC GCCTGGTCGC CCAGGGACCC ATCGCCGGGC TCCGGGCCGG GGAGGCGGTG
AGGATCCGGG TGGAGACACC GGATCTCGCC GGGGCGGCGG CCGTACTGGC GGCCTCCGGG
CTGGCACAGG TCCGCACCGG CGACGGCGAG GTCAGCGCCG AGCTGGGCGC CGCCGCTCCG
GAGCGGATCT GCGCGGAGCT GGTGGCCGGC GGCGTCGCCG TACGCGGCCT GGCCGTGCAG
CGGCCGAGTC TTGAGGACGT GTTCGTGGGC CTGACCGGAG AGGGTTTCGA TGTCAACGGT
TAG
 
Protein sequence
MESRAGRDAV TGGEAVPAVR ERTPSATLPA EDCSIVTRGL TKRFRSGQVA VDALDLAVPR 
GSVFGFLGPN GSGKTTTIRM LLGLAAPTEG TWELLGTPMP GGMASVLSRV GALVEGPAFY
PYLSGEANLR RYDAADPAAD PRTASARIGL ALDRVGLAAA ARKRYRAYSL GMRQRLAIAA
ALLGPRELLI LDEPTNGLDP QGTREVRGLI KEIAAGGTTV FVSSHLLAEV EQMCSHIAVM
RTGRLVAQGP IAGLRAGEAV RIRVETPDLA GAAAVLAASG LAQVRTGDGE VSAELGAAAP
ERICAELVAG GVAVRGLAVQ RPSLEDVFVG LTGEGFDVNG