Gene Sros_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3395 
Symbol 
ID8666683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3734289 
End bp3736055 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content71% 
IMG OID 
ProductLicheninase 
Protein accessionYP_003339075 
Protein GI271964879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.585681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCGT CCCGGAGCCC CGGCCGCCAT CCCCACCGCC TGATCCTGCT CGTCGCCGCG 
GTGGTCACCC TGGTCACCTC CCTGTCCGTC ATCCCGGCCG CCACGGCCGC CGACACCCTG
CTGTCGCAGG GCAGGCCCGT CACGGCGTCG TCGGCGGAGA ACGTGGCCTT CCCCGCCACC
GCGGCCGTGG ACGGCGATCC CGGAACCCGC TGGTCGAGCG CCTTCAGCGA CCCGCAGTGG
ATCCAGGTCG ACCTCGGAGA GGTCGCCACC GTCACCCAGG TGGTGCTGAA CTGGGAGACC
GCCTACGGCA AGGCCTTCCA GATCCAGACC TCCCGCAACG GCGCCGACTG GACCCCGATC
CACTCCACCA CCACCGGGGC GGGCGGCACG CAGACGCTGA CCGTCAGCGG ATCCGGCCGC
TACGTGCGGA TGTACGGCAC GCAGCGCGCC ACCCAGTACG GCTACTCGCT GTGGGAACTG
CAGATCTACG GCACCCTCGG CGGCGGCCCC GACCCGACCC CCACCCCCAC GCCGACGGTC
CCGGGAGGCG ACAGGCTGCT CTCCTACGGC AGGACGGGGG CGGCCTCCTC CTCCCAGAGC
GACCAGAACT GCTGGGAGTG CACCCCGGCC AGGGCCTTCG ACCGCGACCC GGCCTCGCGC
TGGGCGACCA GCTCCACCAC CGGCTGGGTG GACCCGGGCT GGATCTACGT CGACCTCGGC
GCGACCGCGC AGATCACCAA GGTCGTGCTG CAGTGGGATC CGGCCTACGC CAGGGCCTTC
CAGATCCAGG TCTCACCGGA CGCGTCGGCC TGGACCCCGA TCTACTCCAC CACCGCCGGC
ACCGGCTTCA AGCAGACGCT GACCGTCAGC GGATCCGGCC GCTACGTGCG GATGTACGGC
ACGCAGCGCG CCACCCCCTA CGGCTACTCG CTGTGGGAGT TCCAGGTCTA CGGCACCGGA
GGCGCCCCGA TCACCCCGCC GCCGCTGCCG CCCGACCCGG CCGGCCCGCC CAGGCTCGTC
TGGAGCGACG AGTTCAACGG AGCGGCCGGG ACCAGGCCCG ACGCCGCCAA GTGGACGGCC
GACCCCGGCA CCGGCCCGAA CAACGAGCTG GAGTACTACA CCAACCACGA CAACGCCGCG
ATGGACGGTG CCGGCAGCCT CGTCCTGGAG GCGCGCAAGC AGGTCACCGC CGGATCGACC
TGTCCGAGGG ATCCGCTGAG CGGTAGCGGT ACCTGCCAGT ACACCTCGGC GCGGATGAAC
ACCGGCGGCA AGTTCGAGTT CACCTACGGC CGGGTCGAGG CCCGGGTCAA GGTGCCGAAG
GGCAACGGGC TGTGGCCGGC GTTCTGGATG ATGGGCGCGG ACTTCCGCAC CGGCAGGCCG
TGGCCGTACA ACGGCGAGAT CGACATCCTG GAGGTCCTGG GCAAGGACGT GAAGACCGCC
TACTCGACCG TGCACGCACC CGCCTACAAC GGCGGTGGCG GGGTCGGCGG CTCCTACAGG
CTCCCCGGCG ACGCGGACTT CTCCGACGAC TTCCACGTCT GGGCGGCCAA CTGGGACAGC
AAGGGCATCG TCTACACCCT GGACGGCCGG ACGGTCTTCA CCATCGACAA GGCGGCGGTG
GAGGCGACAC GGGGTCCATG GGTCTTCGAC CACCCCTTCT ACATCATCCT CAACCTCGCG
GTGGGCGGTG ACTGGCCCGG CCCGCCGGAC GCCACCACGC CCTTCCCCCG GAAGATGCTC
GTCGACTACG TGCGCGTCTA CCAGTAG
 
Protein sequence
MHSSRSPGRH PHRLILLVAA VVTLVTSLSV IPAATAADTL LSQGRPVTAS SAENVAFPAT 
AAVDGDPGTR WSSAFSDPQW IQVDLGEVAT VTQVVLNWET AYGKAFQIQT SRNGADWTPI
HSTTTGAGGT QTLTVSGSGR YVRMYGTQRA TQYGYSLWEL QIYGTLGGGP DPTPTPTPTV
PGGDRLLSYG RTGAASSSQS DQNCWECTPA RAFDRDPASR WATSSTTGWV DPGWIYVDLG
ATAQITKVVL QWDPAYARAF QIQVSPDASA WTPIYSTTAG TGFKQTLTVS GSGRYVRMYG
TQRATPYGYS LWEFQVYGTG GAPITPPPLP PDPAGPPRLV WSDEFNGAAG TRPDAAKWTA
DPGTGPNNEL EYYTNHDNAA MDGAGSLVLE ARKQVTAGST CPRDPLSGSG TCQYTSARMN
TGGKFEFTYG RVEARVKVPK GNGLWPAFWM MGADFRTGRP WPYNGEIDIL EVLGKDVKTA
YSTVHAPAYN GGGGVGGSYR LPGDADFSDD FHVWAANWDS KGIVYTLDGR TVFTIDKAAV
EATRGPWVFD HPFYIILNLA VGGDWPGPPD ATTPFPRKML VDYVRVYQ