Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3354 |
Symbol | |
ID | 8666642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 3681732 |
End bp | 3685199 |
Gene Length | 3468 bp |
Protein Length | 1155 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Indolepyruvate ferredoxin oxidoreductase |
Protein accession | YP_003339036 |
Protein GI | 271964840 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0073722 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGATCT TCGCAGACGC CCGTGAGGTG ACGCCCGACG ACCGGTACGT CCTCGACGAG GGCCAGGTCT TCATGACCGG CACACAGGCA CTGGTCCGCG TGATCCTCGA CCAGATGCGC GCCGACCGCT CCGCCGGCCT CGACACGGGC ACGATGGTGT CGGGCTACCC CGGCTCCCCG CTCGGCGGCT TCGACCAGGA ACTCGCCCGC TCCCACAAAC ACGCCGGACC ACTCGGCGTC GTGCACCGGC CGGGCCAGAA CGAGGAACTG GGCGCCACCG CCGTCTGGGG CAGCCAGCTC GTGCCGGCGC TCCCCCGGCC GCGCAAGGCG GGCGTCCTGG GCGTCTGGTA CGGCAAGGCC CCCGGTGTCG ACCGCGCGGC AGACGCGTTC CGGCACGGCA ACTTCGTCGG CGCCCACCCC GACGGCGGCC TGATCGCCTT CTGCGGCGAC GACCCGACGT GCAAGTCCTC GACGCTGCCC TCGGCCACCG AGAGCGCACT CGCCGCGCTG GGCATGCCGA TCGTCCACCC CGGCAGCGTG CAGGAGCTGC TCGACCTGGG CCGCCACGCG ATCTCGGCCT CCCGCGCCAG CGGCCTGTGG GTGGCGGTGA AGGCGGTCAC CAACGTGGTG GACGGCACCG GCACGGTCGG CGTCGGCCCT GGCCGGGTGG TCCCGGTCAT GCCGGTCGTC GAATACGAGG GCAGGCCGTA CCGTCACACT CCGGACGCCA CCCTGCTCAC CCCCTGGTCG CTGGAGATGG AGCGGACGCT GGTCGGCCCG CGTCTGGAGC TGGCGCGCGC CTACGCAAGG GAGAACGGCC TCAACCGGAT CACCGTCGAC CCCCGTGACG CCTGGCTCGG CATCGTCGCC TCGGGCACCG CCTACCACGA CGTGTGCGAG GGGTTCCGCA GGCTGGGCGT GGACCCCGCC GAGCTCGGCG TCCGCATCCT CAAGATCGGC ATGCTCTGGC CGCTGGAGCC CGGCATCGTC CGGACCTTCG CCCGGGGCCT GGAGGAGATC CTGGTCGTCG AGGAGAAGGC CCCGCTGCTG GAGACCCTGG TCAAGGACGT CCTGTACGGC ACCGCCGACG CCCCGCGCGT CCTCGGCAAG CTCGACGAGA ACGGCGCGGC CCTGATCCCG CGGGCCGGGG GCGTCGACGC CGACCTGGCC GCCAAGGCGA TCGCCTTCCG GCTGCGCCGC AAGGGCCTGG ACGGCCGCGC CGAGATCGCC AAGGGCCTGG CCGTGATCTC CCGCCCGGCA CCGCTGAAGC TGCTCGGCGC GGAGCGCACC CCGTTCTTCT GCTCGGGCTG CCCGCACAAC CGCTCCACCG CCGTTCCGGA CGGCGCCCCG GTGGGCGCGG GGATCGGCTG TCACACGATG GTGGTGCTCA ACCGCGAGGG CAAGGGCACG CTGACGGGCC TGACCCAGAT GGGCGGCGAG GGCACCCAGT GGATCGGCCA GGCGCCGTTC ACCGACACCC CGCACATCTT CCAGAACCTG GGTGACGGCA CCTTCCACCA CTCCGGCTCG CTCGCCGTGC GCGCCGCCGT GGGCGCGGGC GTCAACATCA CCTACAAGCT GCTCTACAAC AGCGCCATCG CCATGACCGG CGGCCAGACG ATCACCCCGT CCCTCGCCGT GGCCGACCTG ACCCGCTGGC TGGAGGTGGA GGGCGTGCGC CGGGTGATCG TCACCACCGA CGAGCCCGAG CGCTACCGGG GGATCAGGCT GGCCCGGATC GCCGAGGTCC GCGACCGCAC CGCGCTGGAG GAGGCGCAGC GCGAGCTGGC CGCGATCCCC GGCGTGACCG TGCTGGTCCA CGACCAGCAG TGCGCGGCCG AGAAAAGGCG GCTGCGCAAG AAGGGCCTCC TGCCCGACCC GGTCAGGCGG GTGGCGATCA ACCAGCGGGT GTGCGAGGGC TGCGGCGACT GCGGGCAGAA GTCCGAGTGC CTGTCGGTGC TGCCGGTGGA GACCGAGTTC GGCCGCAAGA CCGAGATCCA CCAGTCGTCG TGCAACAAGG ACTACTCCTG CCTGGAGGGC GACTGCCCCT CCTTCCTGAC CGTCACGCCG GGCAAGGCCG CCGGGAGGCG CGCCGCCGTA CCTGCTCCCC CGGCGCTGCC GGCGCCGCCG GCGCGCACCG GGGCGACGAT GATCCGGCTG GTGGGCATCG GCGGCACCGG CGTGGTGTCG GTGGCGCAGA TCCTCGGCAC CGCCGCGATG TTCGACGGCA GGCAGTCGCG CGGGCTCGAC CAGACCGGCC TGGCCCAGAA GGGCGGCACG GTCGTCTCCG ACATCCTGAT CTTCGAGGGC GACGACGACC GGTCCGGGCG GGCGGGCACG GCCGGCGTGG ACGCCTACCT CGCGCTCGAC CTGATCGGCG CCACCGACCC CAAGCAGCTG AGCGGCGCCG GCCGTGACCG GACCGTCGCG GTGGTCTCCA CCAGCCTGGT CCCCACCGGC TCCATGGTCC TCGACCCGTC CACGCACGTC ACCGACCTCG GCTCGCCGAT CGGCGCGCTG GAGTCGCGCA CCCGGCGCGA GCTGAACGTC TATCTCGACG CCGAGGACGT GGCCCAGAAA CTGTTCGGCG ACCACATGCC GGCCAACACG ATCGTGGTCG GCGCGGCCTG GCAGCGCGGG CTCATCCCGC TCAGCCTGGA GTCGATCGAG CGGGCCATCC GCCTGGGCGG CGGCAGGAGC GCGGAGCGGA CGATCGCCGC CTTCCACTGG GGCCGGGCCG TCGTCGCCGC CCCGGAGTCC GTGGCGCGGG CGACCGGCGC CCCCGCACCG GCCGGACGGC CGGCGAGCCC CGAGGTCGCC GGCCTCGTCG ACTCGGTCGC CGCGGCCGGC ACCGAGCTGC ACCGGATCCT GACGGTCCGG GTGGCCGACC TCGTCGCCTA CCAGAACCTG CGCTACGCCA CCCGCTACGC CGACGCGGTA CGCGCGGTCC TCTCCCGGGA GCGGGAGACC TCGGCGGAGC GGTGCCCGAT CACCGAGGCC TACGCCCGCC ACCTGCACCG CCTGATGGCC TACAAGGACG AGTACGAGGT GGCCCGCCTC CACCTCGACC CGGACGAGAG GGCCCGCATC GCCGCCGAGT TCGGTCCCGG CGCGAAGATC TCCTACAACC TGCACCCGCC GGTCCTGCGC GCCCTGGGCA TGAACCGCAA GATCCGCCTC GGCGCCTGGT TCGACCCGGC CTTCCGCCTG CTGTACGGCA TGCGCGGGCT GCGCGGCACC CGGCTGGACC CGTTCGGCAT GGCCGGGGTG CGCAGGACCG AGCGCGAGCT CGTCGCCGAG TACACCCGCG ACGTGCACCG CGCCCTCTCG CACCTGCGCC CGGAGACCGG GGACCGGGTC CTCGAACTGG CCGAGCTGCC GGAGGTGATC CGCGGCTACG AGCACGTCAA GACGCGCAAC GTGGCCGCCT ACCGGGAGCG GGTGGCGGCC CTGCTCGCCG CGCTATGA
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Protein sequence | MTIFADAREV TPDDRYVLDE GQVFMTGTQA LVRVILDQMR ADRSAGLDTG TMVSGYPGSP LGGFDQELAR SHKHAGPLGV VHRPGQNEEL GATAVWGSQL VPALPRPRKA GVLGVWYGKA PGVDRAADAF RHGNFVGAHP DGGLIAFCGD DPTCKSSTLP SATESALAAL GMPIVHPGSV QELLDLGRHA ISASRASGLW VAVKAVTNVV DGTGTVGVGP GRVVPVMPVV EYEGRPYRHT PDATLLTPWS LEMERTLVGP RLELARAYAR ENGLNRITVD PRDAWLGIVA SGTAYHDVCE GFRRLGVDPA ELGVRILKIG MLWPLEPGIV RTFARGLEEI LVVEEKAPLL ETLVKDVLYG TADAPRVLGK LDENGAALIP RAGGVDADLA AKAIAFRLRR KGLDGRAEIA KGLAVISRPA PLKLLGAERT PFFCSGCPHN RSTAVPDGAP VGAGIGCHTM VVLNREGKGT LTGLTQMGGE GTQWIGQAPF TDTPHIFQNL GDGTFHHSGS LAVRAAVGAG VNITYKLLYN SAIAMTGGQT ITPSLAVADL TRWLEVEGVR RVIVTTDEPE RYRGIRLARI AEVRDRTALE EAQRELAAIP GVTVLVHDQQ CAAEKRRLRK KGLLPDPVRR VAINQRVCEG CGDCGQKSEC LSVLPVETEF GRKTEIHQSS CNKDYSCLEG DCPSFLTVTP GKAAGRRAAV PAPPALPAPP ARTGATMIRL VGIGGTGVVS VAQILGTAAM FDGRQSRGLD QTGLAQKGGT VVSDILIFEG DDDRSGRAGT AGVDAYLALD LIGATDPKQL SGAGRDRTVA VVSTSLVPTG SMVLDPSTHV TDLGSPIGAL ESRTRRELNV YLDAEDVAQK LFGDHMPANT IVVGAAWQRG LIPLSLESIE RAIRLGGGRS AERTIAAFHW GRAVVAAPES VARATGAPAP AGRPASPEVA GLVDSVAAAG TELHRILTVR VADLVAYQNL RYATRYADAV RAVLSRERET SAERCPITEA YARHLHRLMA YKDEYEVARL HLDPDERARI AAEFGPGAKI SYNLHPPVLR ALGMNRKIRL GAWFDPAFRL LYGMRGLRGT RLDPFGMAGV RRTERELVAE YTRDVHRALS HLRPETGDRV LELAELPEVI RGYEHVKTRN VAAYRERVAA LLAAL
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