Gene Sros_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3300 
Symbol 
ID8666588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3593521 
End bp3594978 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003338982 
Protein GI271964786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.879747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTGA TCTACGAGGG CATCCTCACG ACGGAATGGA AGTTCAGGTT GATGTCACAA 
CGACCCGGAT CCGCGCTCAC CGCGCTGGCC TGCGCCCTGC TGGCGCTGGC CACCTCCGGC
ACGCCGGTGG CGGCCGCCAC CGGCACACCC GCCACCACCG TGCGGCAGGC CGCCGCGCAA
GCCGCCGCTG CGCCCTGTGT CCGGCCGGGC CAGGCGACCT ACCCGGTCGA CTACTACTGG
AAGAACGTCC TCGGCATGCG GCTGGGCAGC GGGTCGGTCG CGGTCGACAC CTCCCCGTCC
CTGTGGGGCG GGCAGATCGC ACCGGGCGCC ACCTTCACCC TCACCCTGGC CCACCGCACC
GCCCAGTGGC CGCTGCTGGT CAGGAGCTAC ACCACGATGT GGGACCTGTC GTCCCTGCTG
GCCAACGCCG ACATCGTCAG CCAGTCAGGG GCGGGCACCA TCAGCGGCAC CACCCTGTCG
ATCAGCTCGC AGGGGTCCAA GACCGACCCG GCCGCGAAGG TCATCACCTT CCGGGTCAGG
CAAGGCACCA TCGGCAACAG CATGACCATC CGGCCCACCG GGATCAGCAG CGTCCTCGCA
GCCCCGGGCC AGCTCGGAAA CAACGCACCC GCCCCGCCGA TCCAGATCGT CAGCGGGCAG
TCCATCTCCC CCACCAGCGC CGCCGCCGAC AGCGCCACCA CCGCGATGGG CACGGCCGTC
AGCGTGCCCG TCCTGGCCAA CGACACCGCG GCCGCACCGG CGATCAGCGC TCTCACCCAG
CCGGGCAACG GCACCGCGAC GATCTCCGGC GGCACCGTGA TCTACACCCC CGCCGCGGGC
TTCATCGGCA CCGACACCTT CACCTACACC ATCACCACGG CCTGCGGGAC CAGCACCGCC
ACGGTGACGG TCACCGTCCC CTGTCCCTGG AAACCGGTCA ACCTGGTCAA CGGCAGCTTC
GAGGCGCCGC CCGTGGCCTC GATCGACTGG TCCATCCCCG ACGCCTCCAC CAACCCGAGC
GTCGGCTGGC ACACCACCGC CACCGACAAC AAGCTGGAGT TCTGGCGCGG CGGCGCGAGC
GGGATTCCGG CCGCCGACGG CCAGCAGTTC GCCGAACTCA ACGCCAACCA GGTCTCGATG
CTCTACCAGG ACCTGCCCAC CGTTCCGGGG ACTCCGATGA CCTGGTCGCT GTATCACCGG
GGCCGCCTGG GCACCGACGT GATGCGGGTG CTCATCGGCG CCCCGGGCTC GACCGCGGCT
CAAGTCCCCA CCGGGGCCTC CTCCGCGGAC ATCTCCGACG ACAACACCGC CTGGCGCCGC
TACACCGGGG TGTATGTCGT CCCTCCGGGG CAGACCGTCA CGCGATTCGC CTTCGAGTCG
GTGTCGGCCG CGGGTGGCAG CCCGACGGCC GGCAACTTCC TGGACGGCGT GACTTTCCAA
ACGCCGCCCT GCCCGTAA
 
Protein sequence
MKLIYEGILT TEWKFRLMSQ RPGSALTALA CALLALATSG TPVAAATGTP ATTVRQAAAQ 
AAAAPCVRPG QATYPVDYYW KNVLGMRLGS GSVAVDTSPS LWGGQIAPGA TFTLTLAHRT
AQWPLLVRSY TTMWDLSSLL ANADIVSQSG AGTISGTTLS ISSQGSKTDP AAKVITFRVR
QGTIGNSMTI RPTGISSVLA APGQLGNNAP APPIQIVSGQ SISPTSAAAD SATTAMGTAV
SVPVLANDTA AAPAISALTQ PGNGTATISG GTVIYTPAAG FIGTDTFTYT ITTACGTSTA
TVTVTVPCPW KPVNLVNGSF EAPPVASIDW SIPDASTNPS VGWHTTATDN KLEFWRGGAS
GIPAADGQQF AELNANQVSM LYQDLPTVPG TPMTWSLYHR GRLGTDVMRV LIGAPGSTAA
QVPTGASSAD ISDDNTAWRR YTGVYVVPPG QTVTRFAFES VSAAGGSPTA GNFLDGVTFQ
TPPCP