Gene Sros_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3298 
Symbol 
ID8666586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3590539 
End bp3592185 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content71% 
IMG OID 
ProductN-acyl-D-amino-acid deacylase 
Protein accessionYP_003338980 
Protein GI271964784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAATCC CGAGTGGCGC AGTGGAAAGG GGGGCTCGCA TGCCCAGCAC GCTGATCATC 
CGGGGTGGGA CGGTCTACGA CGGAACCGGG GCTCCGGGAC GTTCGGCCGA TGTCGCGGTG
GAGGGGGATC GGATCCTCGG CGTTGGTTCC ATCCCTGACT CGGAGGGGGC GATGGTGCTC
GACGCGGCGG GGTGCGCCGT CGCCCCCGGA TTCATCAACG TGCTCAGCCA TGCTTATCTG
GCGCTTCAGC AGGATCCACG CGGGTTGTCC GATCTTTATC AGGGTGTGAC GACGGAGGTC
TTCGGCGAGG GCGTCTCCCT GGGGCCGGTT GCCGGGCGCA TGCTGGAGTC GGTCCCCGTC
GGCAAGGTGG AGGCCGACGG CACGCGGCTG GGCTGGCCGC GGCTGGCGGA TTTCCTCGGT
GACCTGTCGT CGGCGGGTGT CGCCCCGAAC ATCGCCAGCT TCGTCGGGTC ACACAACCTG
CGCATGCTCG GCGCCGGGAA CGACAACCGG CCGCTCACCC GGGCTGAGCT GGACGCGGCC
GCGGCGCTGC TGGATGAGGA GCTGTCCGAC GGAGCGCTGG GCGTGGGGTC GGCGCTGATC
TACCCGCCGG AGAGCTACTC GTCCACCGAG GAGCTCATCG CCCTGACGCG CGTGCTGAGC
CGGCACGACG CCCTCTACAT CTCCCACATC AGGAGCGAGG GCGATCGCCT GGTCGAGGGC
ATCGAGGAGA TTCTGCGCAT CGGCCGCGAG GCCGGGACAC GCGTGGAGGT GTACCACCTC
AAGGCCGCCG GGCGGGACAA CTGGCACAAG ATGGCGCTTG CGATCGACCT CATCGACGCG
GCCCGCGCGT CGGGCCAGCC GGTGACCGCC GACGTCTACC CCTACGAGGC GGGCAGTACG
TCGCTGGGAG CGGTCATCCC GCCGCCGTTC CACGCGGGCG GCCAGGGCCG GTTGCTGGAG
CGGCTGCGCG ATCGCGGGGT CCGGGAGGAG ATGAAGACCG CCATCCGACG CCCTTCAGTC
GAGTGGGAGA ACCTCTACCT CGCCGCGGGC GGGCCTGAGC AGGTGCTGCT GCTGTCCAAC
GCCGCGGACG GCTCGCTCAC CGCGGGACTG ACCCTGGCCC AGGCCGCCGC TCGCGCGGGA
GCGGATGATC CGCTCGACCT GCTGCTGGAC CTGGTGGAAG GCGACCCCGA GATGATGGCG
GCCTACTTCA TCGGGCATCA GGACAACATC CGGATGGCGC TGCGCCGCCC CTGGGTTTCG
ATCTGCTCCG ACTCCGAGTC GGTGCCGGCC GAGCCTCCGT TCACCGACCT GCCGGTCCAT
CCCCGGGCGT ACGGCAGCTT CGCCAGGATC CTGTCGCGGT ACGTCCGCGA GGAGGGACTG
CTCAGCGTGG AGGAGGCCGT ACGGCGGATG ACCTCGCTGC CCGCCGACAC CCTCCGGCTG
GCGGGGCGGG GCCGGATCGC TCCCGGCGCC TACGCCGACC TCGTGGTCTT CGATCCGGAG
ACCGTCCACG ACCACGCGAC CTACGAGCGT CCACACCAGT ACGCGACCGG CGTCCGCCAC
GTGGTGGTCA ACGGAATCGC CGCGCTGCGG GACGGCACCC CCACCGGCGC TCTGCCGGGA
CGCGCACTGC GCCGCGGTCA GGGGTGA
 
Protein sequence
MRIPSGAVER GARMPSTLII RGGTVYDGTG APGRSADVAV EGDRILGVGS IPDSEGAMVL 
DAAGCAVAPG FINVLSHAYL ALQQDPRGLS DLYQGVTTEV FGEGVSLGPV AGRMLESVPV
GKVEADGTRL GWPRLADFLG DLSSAGVAPN IASFVGSHNL RMLGAGNDNR PLTRAELDAA
AALLDEELSD GALGVGSALI YPPESYSSTE ELIALTRVLS RHDALYISHI RSEGDRLVEG
IEEILRIGRE AGTRVEVYHL KAAGRDNWHK MALAIDLIDA ARASGQPVTA DVYPYEAGST
SLGAVIPPPF HAGGQGRLLE RLRDRGVREE MKTAIRRPSV EWENLYLAAG GPEQVLLLSN
AADGSLTAGL TLAQAAARAG ADDPLDLLLD LVEGDPEMMA AYFIGHQDNI RMALRRPWVS
ICSDSESVPA EPPFTDLPVH PRAYGSFARI LSRYVREEGL LSVEEAVRRM TSLPADTLRL
AGRGRIAPGA YADLVVFDPE TVHDHATYER PHQYATGVRH VVVNGIAALR DGTPTGALPG
RALRRGQG