Gene Sros_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3290 
Symbol 
ID8666578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3585211 
End bp3585774 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content73% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003338972 
Protein GI271964776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCCT CCGGGGAGGA GCCCGGTCTG GAGGACCTCC TGGCCCAGGT GGCACTGGGG 
CGCGAGCAGG CCTTCAACCG GGTCTACGAC CTGCTGGCCG GCCCGGTGTT CGGCCTGGCC
CGGCGGGTCG TGCGGGACCG GGCCCAGGCC GAGGAGGTCG CACAGGAGGT CCTGGTCGAG
GTGTGGCGCA CCGCGTCCCG GTATGACCGG ACGCGGGGCA GCGCCCTTTC GTGGGTGATG
ACCATGGCCC ACCGCCGCTC GGTGGACCGG GTCCGGTCCG CGCAGGCCTC GGCCGACCGG
GAGGAGAAGG TCTCCCGGAT GTCCGGGGAG GTCGCCTACG ACCAGGTCTC CGAGGTGGTC
ACCACCCGCC TGGAGGGGGA GCGGGTGCGT CGCTGCCTCG GCGGCCTGAC CGATCTCCAG
CGGCAGGCCG TGACCCTCGC CTATTACGGT GGCTACAGCT ATCCGGAAGT GGCGGGGCTG
CTCCGGGTGC CGCTCGGCAC GATCAAGACC AGGATGCGCG ACGGACTCGT CCGGCTCCGC
GACTGCATGG GGGTGGAACG ATGA
 
Protein sequence
MPASGEEPGL EDLLAQVALG REQAFNRVYD LLAGPVFGLA RRVVRDRAQA EEVAQEVLVE 
VWRTASRYDR TRGSALSWVM TMAHRRSVDR VRSAQASADR EEKVSRMSGE VAYDQVSEVV
TTRLEGERVR RCLGGLTDLQ RQAVTLAYYG GYSYPEVAGL LRVPLGTIKT RMRDGLVRLR
DCMGVER