Gene Sros_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3163 
Symbol 
ID8666451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3445247 
End bp3445918 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003338851 
Protein GI271964655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTC CGAATCCGTC TCCCGGCGGG CCGGGCGTCC CCGGCACCGC GAGACCGAGC 
TCCCAGGGCG CCAGGAGGCC GCGCGCCGAC GCCCAGCGCA ACCGGGCGCG CATCCTGGCC
GCGGCCGAGG CGGTCTTCGC CGAGAAGGGG CCGTCGGCGT CGACCGACGA GGTCGCGGCC
AGGGCTGAGC TGGCGATCGG CACGGTCTTC AAGCACTTCC CGACCAAGCA GGCCCTGCAG
CAGGCCCTGA TGAGAGACCT CCTGTCCGAC CTCACGCGGG AGGTGCAGGC GCTCACCACC
GACGGCGACC CCGCCACGTC CCTGTTCGGC TTCATGACCC GCGTGGTCGA GCAGGCGGCC
CAGAAGAAGA CCGTCGTCGG TCTCCTGGCC GATACCGGCG TCGTCCTCCA GGTCGCCGAC
TCGCTGCTGC TCCTGCGCGA CGGGCTGGAG GGGCTTCTGG CCCGCTCCCA GCAGGCCGGC
GCCGTCCGCG AGGACGCCCG CGCCGACGAG GTGATCGCCC TGATCACCGG CTTCTCCCAG
GGCGCGCTGC ACGCCCGCTG GGACCGTGAT CTCCGGCACC GCACCCTCGC CCTCGTGTTC
GACGGGCTCC GCCCGCCCGG AGCGCGCCGG TCCTCACGAC CCGCGGCCGG ATCGCCGGGA
TGCGCCCCCT GA
 
Protein sequence
MTLPNPSPGG PGVPGTARPS SQGARRPRAD AQRNRARILA AAEAVFAEKG PSASTDEVAA 
RAELAIGTVF KHFPTKQALQ QALMRDLLSD LTREVQALTT DGDPATSLFG FMTRVVEQAA
QKKTVVGLLA DTGVVLQVAD SLLLLRDGLE GLLARSQQAG AVREDARADE VIALITGFSQ
GALHARWDRD LRHRTLALVF DGLRPPGARR SSRPAAGSPG CAP