Gene Sros_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3077 
Symbol 
ID8666364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3357727 
End bp3359865 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003338770 
Protein GI271964574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.203761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTACG TGGAGAGACC GCCACACATC GATCCCGTGC GGATGCGTCA CATCACCGAT 
GAGGACCTGC TCGCGGCGAC CGGGACCGCG ACGGTGGAGG AGCTGCGCCG CCACCTGTCC
ACCAGGACCG GGCCCCGGCC GGTGTTCGAC GTCGCCCGCT GGGCGGCGGC CATGTCCGGG
ACGGAGGCCG CCGCGCAGGC CGTCGCCGCC GCCGACGAGC TCCTCGGCAC CGAGGTCGAC
TTCCTGGACA AGGGGCGCGG ACGGTCGAGG CTCTACGGAT TCCACTACCT GAGGTGGATG
TCGCCGCTGG TCTCGGCCTA CGCGCTGACC GGCGACCCGG CCTACGCCAA GGAGTGGGAC
CGGCTGTTCG GCCAGTGGTA CGACAGCCGG GACCACGTGG CCGGCGACTG GCCCGGTCTC
GACGTCATCT GGTACTCCCT CGGCGTCTGG GCGCGCTCCT CCCTGGTCAC CCAGGCACTG
GCGGTCTTCG GCGAGGAGCC CGCGCTCAGC CGCGAGGGCT GGCTGCGGAT GGTGAAGACC
ATCCTGGGCG GCGCCCGCTG GGCGGCCGAG GAGCACGACG AGTTCCGGCA GGGCAACTGG
CAGTTCGCGT GCGCGTCCGA GCTCCTGCAC GTCGCCGCGG TCTTCCCCGA GTTCGGCGAG
GCGGGCGGCT GGGCCGAGAT CGCCAAGGCG CGGATCCTCG ACCACCTCGA ACTCGACGTC
CGGGCCGACG GCGGGCACCA CGAGCGCTCT CCCGGCTACC ACAGCATGTG CGTCGAGGCC
GTCCAGCGGG CCGCTGTCAT CGGCGAGCAG TACCTGGGCT GGGACCTGGC CGGCCACCCG
AGGGTCCGGG CCATGCACGA CTGGTACGTC GCGCTCGTCA CCCCCGCCGG GTGGATCCCC
CACCTGCAGG ACAGCGGTCT GTTCTGGCCC GCCGCGCACC TGCTGCGCGG CCACTACCTG
CTCGGCGATC CCGGCTACGA GGAGCTCGCC CGGCGCTGGC TGACGCCCGA GCAGCTGCGC
GGCGAGCTGG CGTGGCTGCC GCCCCGCCCG GACGGCGCGC CCGTGCCCGC TCCGGCGAGC
GAGCCCGACT CCTCCTCCCG CACCCTGGAC ACCAGCCGGT ACGCGGTCTT CCGCACGGGA
TGGGAGCCCG ACTCGCTGCA CACGGTGGTG AACTACGGGC CGTTCGTCGG CCACGAGTTG
GAGCCGCACA GCCACCACGC GGCGCTGGAC TTCGTACTGT CCGGCTGGGG CGTGCCCCTC
GCGTGGGAGG CGGGCGGTCC GCCGTCCTAC GACGATCCCG GCTACTACGA CTGGTACCAG
GCGACCCGCG GGCACAACAC GGTGCTCCTG CCGGGCGAGG AGTTCGTCGC CGACCGTGAC
GCCACCTGCG ACACGTTCGC GGCCCTGCCG CACGTGGACG TGTTCGCGGG CCATCACCAC
GGCTACCCCA GCAGGCACGA CCGGCGGATC GTCTTCGTCC GCGACTCCCC GTCGTACTGG
CTGGTGACCG ACGAGATCGA GGACGGCCCG GAGGCCGTCT GGCAGGTGCA CGGCCGCTCG
CCCTGGACGG AGCGGGCCGG AGGGCACGCC AACGTGCGGG GCCCCGGCCT CTACGTGATC
CCCGCCGACC CCGAGGCGGT CACGGGCGTC CTGCACGGCC GCGGGCCGAG CCGGATCCCC
GACCCCGTGG CCAGGACCGC GGAGTACGGC GAGGTGCACA CCCTCGGCCT GCGTCAGCGG
GCCGGAACGT TCACGGTCGG TCTCTTCCCC TACGCCGAGG ACCCTCCGGC GGTACGGCTG
CGCGGAGGCG AGGTCTCCCT CGACGGCGTC GTCGACGCCT TCTCGGGTCA CCAGTGGACG
CGCTGCGACA CCGAGGGAGT CCTGCTCGCC GCCGCCTGCT GGGGCCCCTC CCTCGTCCAC
GACGGGATCG CCCTGGTCGA GGCCCGCGGA CTGGTCGCGG CCGACGTCAC CTACCGCGGA
GGATTCGCCG CGGTGGTGGA CACCGACCGG TGCACCGAGC TGAGGGTCCA CGCCCCCGGC
GTGACCAGGC TCGCGCTCAA CGGGGTACGG CTGCGCCCGG GCCTCACGGT CACCCTCCCG
TCGTCCGGTC GATGGCACCT GGAAGCAGCC GATGAGTAG
 
Protein sequence
MQYVERPPHI DPVRMRHITD EDLLAATGTA TVEELRRHLS TRTGPRPVFD VARWAAAMSG 
TEAAAQAVAA ADELLGTEVD FLDKGRGRSR LYGFHYLRWM SPLVSAYALT GDPAYAKEWD
RLFGQWYDSR DHVAGDWPGL DVIWYSLGVW ARSSLVTQAL AVFGEEPALS REGWLRMVKT
ILGGARWAAE EHDEFRQGNW QFACASELLH VAAVFPEFGE AGGWAEIAKA RILDHLELDV
RADGGHHERS PGYHSMCVEA VQRAAVIGEQ YLGWDLAGHP RVRAMHDWYV ALVTPAGWIP
HLQDSGLFWP AAHLLRGHYL LGDPGYEELA RRWLTPEQLR GELAWLPPRP DGAPVPAPAS
EPDSSSRTLD TSRYAVFRTG WEPDSLHTVV NYGPFVGHEL EPHSHHAALD FVLSGWGVPL
AWEAGGPPSY DDPGYYDWYQ ATRGHNTVLL PGEEFVADRD ATCDTFAALP HVDVFAGHHH
GYPSRHDRRI VFVRDSPSYW LVTDEIEDGP EAVWQVHGRS PWTERAGGHA NVRGPGLYVI
PADPEAVTGV LHGRGPSRIP DPVARTAEYG EVHTLGLRQR AGTFTVGLFP YAEDPPAVRL
RGGEVSLDGV VDAFSGHQWT RCDTEGVLLA AACWGPSLVH DGIALVEARG LVAADVTYRG
GFAAVVDTDR CTELRVHAPG VTRLALNGVR LRPGLTVTLP SSGRWHLEAA DE