Gene Sros_3058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3058 
Symbol 
ID8666345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3334506 
End bp3335234 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content74% 
IMG OID 
Productcarboxymethylenebutenolidase, putative 
Protein accessionYP_003338751 
Protein GI271964555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.566276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCACG ACGCCGGCGC CACCCCGCCC ATCGAACCCG TCGCCTCCGG CCCGCTCACC 
CTGACCTCGG CCGACGGCAC CCGCTTCGCG GCCTACCTGG CCGTCCCCGA GCGGCCCTCG
GGCGCCGGGG TCGTGGTCAT CCCCGACAAC AGGGGACTGG CGCCCTTCTA CGAGCGCCTC
GCCGTACGGC TGGCCGAACA CGGTCACCCG GCGCTCGCCT ATGACCACTT CGGCCGTACG
GCGGGCGCCT CCACCGACGG CCGGGATGAG GGCTTCCCCT CCATGGAGCA CTTCGCCGGG
CTCACCAGGG AGGGGATGCT GGACGACATG TCCGCGGCCG TCGAGCGGCT GCGCGAGTTC
GGGGACACGC AGGCGGCCCT GGGTTTCTGC ATGGGCGGAC GGCTGGCCTT CTTCGCCGCC
GAGCCCCGGT TCGGCCTGGC CGGGGTGATC GGTTTCTACG GCCATCCGGG CCTCGCCGCC
CCCTACGGTC CCGGGCCCGC CCAGCACGCG GGCGAGCTCG CGGCGCCGAT CCTCGGCCTG
TTCGGCGGAG CCGACGAGGG CATCCCGGCG AGCGAGGTGG CGGCCTTCGG CGAGGCCCTG
ACGGCCAACG GCGTGAACCA TGAGCTCGTC ATCTATCCCG GCGCCCCGCA CGGGTTCTTC
GACGCCGGGA ACGGCGAGCA CGCCGAGGCG TGCGCCGACG CCTGGCGTCG CGTCCTCGCC
TTCCTCTGA
 
Protein sequence
MCHDAGATPP IEPVASGPLT LTSADGTRFA AYLAVPERPS GAGVVVIPDN RGLAPFYERL 
AVRLAEHGHP ALAYDHFGRT AGASTDGRDE GFPSMEHFAG LTREGMLDDM SAAVERLREF
GDTQAALGFC MGGRLAFFAA EPRFGLAGVI GFYGHPGLAA PYGPGPAQHA GELAAPILGL
FGGADEGIPA SEVAAFGEAL TANGVNHELV IYPGAPHGFF DAGNGEHAEA CADAWRRVLA
FL