Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3058 |
Symbol | |
ID | 8666345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3334506 |
End bp | 3335234 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | carboxymethylenebutenolidase, putative |
Protein accession | YP_003338751 |
Protein GI | 271964555 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.566276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGTCACG ACGCCGGCGC CACCCCGCCC ATCGAACCCG TCGCCTCCGG CCCGCTCACC CTGACCTCGG CCGACGGCAC CCGCTTCGCG GCCTACCTGG CCGTCCCCGA GCGGCCCTCG GGCGCCGGGG TCGTGGTCAT CCCCGACAAC AGGGGACTGG CGCCCTTCTA CGAGCGCCTC GCCGTACGGC TGGCCGAACA CGGTCACCCG GCGCTCGCCT ATGACCACTT CGGCCGTACG GCGGGCGCCT CCACCGACGG CCGGGATGAG GGCTTCCCCT CCATGGAGCA CTTCGCCGGG CTCACCAGGG AGGGGATGCT GGACGACATG TCCGCGGCCG TCGAGCGGCT GCGCGAGTTC GGGGACACGC AGGCGGCCCT GGGTTTCTGC ATGGGCGGAC GGCTGGCCTT CTTCGCCGCC GAGCCCCGGT TCGGCCTGGC CGGGGTGATC GGTTTCTACG GCCATCCGGG CCTCGCCGCC CCCTACGGTC CCGGGCCCGC CCAGCACGCG GGCGAGCTCG CGGCGCCGAT CCTCGGCCTG TTCGGCGGAG CCGACGAGGG CATCCCGGCG AGCGAGGTGG CGGCCTTCGG CGAGGCCCTG ACGGCCAACG GCGTGAACCA TGAGCTCGTC ATCTATCCCG GCGCCCCGCA CGGGTTCTTC GACGCCGGGA ACGGCGAGCA CGCCGAGGCG TGCGCCGACG CCTGGCGTCG CGTCCTCGCC TTCCTCTGA
|
Protein sequence | MCHDAGATPP IEPVASGPLT LTSADGTRFA AYLAVPERPS GAGVVVIPDN RGLAPFYERL AVRLAEHGHP ALAYDHFGRT AGASTDGRDE GFPSMEHFAG LTREGMLDDM SAAVERLREF GDTQAALGFC MGGRLAFFAA EPRFGLAGVI GFYGHPGLAA PYGPGPAQHA GELAAPILGL FGGADEGIPA SEVAAFGEAL TANGVNHELV IYPGAPHGFF DAGNGEHAEA CADAWRRVLA FL
|
| |