Gene Sros_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2996 
Symbol 
ID8666283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3266988 
End bp3268853 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content74% 
IMG OID 
Productpseudouridine synthase, Rsu 
Protein accessionYP_003338693 
Protein GI271964497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.772965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGCA GGCGTAGTAC CCCGTCCGGT GATGGACGCG GTCGAGGCCG TAGCGGAGCC 
CCGCGCGGTG GCAGCCCCCG TGGGGGCGAC AACTCCCGAG GCGGCTCCCG GTCCGGCGGA
TCCCGTGGTG GATCGCAGGG CGGGTTCCGC TCCGACGCCC CGCGCCGTGA CGACCGCGGC
GGGTTCCGCG CCGAGCGCGA CGGTTCCCGC AGCCGGTTCG GCAGGCCCGC CGAGGGCGGT
CCCCGCTCCG ACGCCCCGCG CCGTGACGAC CGTGGTGGTT CGCAGGGCGG GTTCCGCTCC
GACGCTCCGC GCCGTGATGA CCGTGGCGGG TTCCGTTCCG ACGGCCCGCG CCGTGACGAC
CGCGGCGGTT CGCAGGGCGG CTTCCGCTCT GACGCTCCGC GCCGTGATGA CCGTGGCGGG
TTCCGTTCCG ACGGCCCGCG CCGTGACGAC CGCGGCGGTT CGCAGGGCGG CTTCCGTTCT
GACGCTCCGC GCCGTGACGA CCGTGGTTCG CAGGGCGGCT TCCGCTCCGA CGGTCCCCGC
CGTGATGACC GCGGTGGTTC GCGTGGTGGT TCGCAGGGCA GGTTCCGTTC TGACGCTCCG
CGCCGTGACG ACCGTGGTTC GCAGGGCGGG TTCCGCTCCG ACGGTCCCCG CCGTGACGAC
CGCGGCGGGT TCCGCGCCGA GCGCGACGGT TCCCGCAGCC GGTTCGGCAG GCCCGCCGAG
GGCGGTCCCC GCTCCGACGC CCCGCGCCGT GACGACCGTG GTGGTTCGCA GGGCGGGTTC
CGCTCTGACG CTCCGCGCCG TGACGACCGT GGCGGGTTCC GTTCCGACGG CCCGCGCCGT
GACGACCGCG GCGGTTCGCG TGGCAGGTTC GGTGCCGACC GTGGCCGCGG GGAGGCGCCC
GGCGCCGGTT CCCGCAGCCG GTTCGGCAGG GCCGGCCGAG GGGACGAGGT CCAGACGATC
GGTGGCAAGC GCGCCGACTC CTACGGCGAG CGCCGTACCG TCGCCGACCG CGGCCCCGCG
AAGGCCGAGC GCAGGCCCGG AGCGATCGAC AACGACCGGT TCAAGACCGC CCGCCAGCCC
AAGCGCGACT CGGACTTCTA CGACCGCGAC TACGTCGACG AGCGCGACAC CACCGAGGTC
CCGGACGGCG TCCGGCTGCA GAAGGTCCTC GCCCAGGCGG GCGTGGCCAG CCGCCGGGCC
TGCGAGGACA TGATCGGCGA CGGCCGGGTG ACGGTCGACG GCCAGGTGGT CCGCCGCTTC
GGTGCCCGGG TCGACCCGGC CAAGCAGGTC ATCCACGTGG ACGGCAAGCG CCTGCCGACG
ATGCCCGACC TGGTCTACCT CGCCATCAAC AAGCCGATCG GCGTCGTCAG CACCATGTCC
GACCCCGACG GCCGCCCCTC GCTGGCCGAC TTCGTGGCCG ACCGCACCGA GCGGCTGTTC
CACGTGGGCC GCCTGGACAC CGAGACCGAA GGCCTCATCC TGCTCACCAA CGACGGCGAG
CTGGCCAACC GGCTCACCCA CCCGAGCTAC GGCGTGCAGA AGAAGTACTG GGCGAAGGTC
CCCGGCAGGA TCGAGCGTGA CCTGGGCCGC CGCCTGAAGA AGGGCATCGA GCTGGAGGAC
GGCATCGCCA AGGCCGACTC CTTCACCCTG GTGCAGGAGC ATGGGCAGCA GGCCCTGGTG
GAGGTCGTCC TGCACGAGGG CCGCAAGCAC ATCGTCCGCC GCATGCTGGA GGAGGTCGGG
CACCCGGTCA TCGACCTGGC CCGCATCGAG TTCGGCCCGG TGAAGCTCGG CCGTCTCAAG
CCGGGCACGG TGCGCGCGCT GACCGTCAAG GAAGTCGGCG AGCTCTACGC CGCCGTCGGC
CTGTAA
 
Protein sequence
MNSRRSTPSG DGRGRGRSGA PRGGSPRGGD NSRGGSRSGG SRGGSQGGFR SDAPRRDDRG 
GFRAERDGSR SRFGRPAEGG PRSDAPRRDD RGGSQGGFRS DAPRRDDRGG FRSDGPRRDD
RGGSQGGFRS DAPRRDDRGG FRSDGPRRDD RGGSQGGFRS DAPRRDDRGS QGGFRSDGPR
RDDRGGSRGG SQGRFRSDAP RRDDRGSQGG FRSDGPRRDD RGGFRAERDG SRSRFGRPAE
GGPRSDAPRR DDRGGSQGGF RSDAPRRDDR GGFRSDGPRR DDRGGSRGRF GADRGRGEAP
GAGSRSRFGR AGRGDEVQTI GGKRADSYGE RRTVADRGPA KAERRPGAID NDRFKTARQP
KRDSDFYDRD YVDERDTTEV PDGVRLQKVL AQAGVASRRA CEDMIGDGRV TVDGQVVRRF
GARVDPAKQV IHVDGKRLPT MPDLVYLAIN KPIGVVSTMS DPDGRPSLAD FVADRTERLF
HVGRLDTETE GLILLTNDGE LANRLTHPSY GVQKKYWAKV PGRIERDLGR RLKKGIELED
GIAKADSFTL VQEHGQQALV EVVLHEGRKH IVRRMLEEVG HPVIDLARIE FGPVKLGRLK
PGTVRALTVK EVGELYAAVG L