| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2975 |
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| Symbol | |
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| ID | 8666262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | - |
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| Start bp | 3238495 |
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| End bp | 3244200 |
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| Gene Length | 5706 bp |
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| Protein Length | 1901 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | WD40 repeatdomain-containing protein-like protein |
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| Protein accession | YP_003338672 |
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| Protein GI | 271964476 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCG ACGACAGGCC GGTCGACATC TTCGTCAGCT ACTCCCCCGC CGACGAGCGC
TGGGCGTCGT GGATCGCGTG GGAGCTGGAG GCCGCCGGAT ACCGGACGAT GATCCAGGCC
TGGGACTTCG TGCCGGGAAC CCAGTTCATC GAGTTCATGG ACCGGGGGGT CAGCGAGGCC
GCGCTCGTGG TGGCGGTGCT GTCGCGCAAC TACCTCAAGT CGCGCTGGGG GCGGATGGAG
TGGCAGGCCG CGCTCCGCGC CGATCCGGAC AACCCCTCCA ACAAGCTGGT CACGATCCGG
CTGGAGGACT GCCCGCTGGA GGGACTGCTG TCCACGATCA CCTGGGTGGA CCTGGTCGGG
GTCGCCGATC CGGACCAGGC GCGGGCGCTG CTGCTCAACC GGATCGGCCA GGCTCTGGCG
GGCCGGGCCA AACCGCTGGA CCGGCCGTCG TTCCCCAACG GCCCGGCGAC CATCCCCGGC
GAGGTGCTGC CCGCGCCGTC CGGGCGCGGG CAGGCGCGGG CCCGCCGTAC CCCGGTGGCG
CCGCCCGCGT ATCCGGCGGG GCCGTCGGCG CACGTCCCGC GCGAGTCGAT CACGCTGCTG
CACGTCGCCG GCCCCCGGTT CGGCCGGGGG CTGGCCGACG AGGACGAGCC GCTGACGGCC
GAGGAGCTGC AGCCGAGGAT CTGGGCCGAC CTCACCCGGC TGCGGGACGC CGGGCTGCCC
CGGCCGGACC TGATGGTCGT GACCGGAGAC CTGACCGAGT CGGGCGGCCG CCGGGAGTTC
GGCGAGGCGG CGGCGTTCCT GACCGGGCTG CGGGTGCTGC TCGGACTGGA GCCGCAGCGG
CTGATCGTCG TACCCGGTCC GAGGGACATC ACGAAGGCCG CCTCCCGGGC GTACTTCAGC
AACTGCGAGG CCGACGACGT GCGCCCGCAG CCGCCGTACT GGCCCAAGTG GCGCCACTTC
ACCGGCCTGT TCGAGGAGCT CTACCTCGGG CTCGACGGAC CGGAGTTCGA CAGCGCCCAG
CCGTGGACGC TCTTCGCCGT CCCCGATCTG AAGGTCGTGG TGGCCGGACT GAACTCCACC
ATGGCCATGA GCCACCGCGA GGAGGACCGG TACGGCTCCG TGGGCGAGGC GCAGGCGGCG
TGGTTCGCCG AGCGGCTGCG GCCGTTCGAG GAGGCGGGCT GGCTGCGGAT CGGCGCGGTC
GCCCACCCGC CCGCTCCCGC GCACCTGCGC GACACCTCGA CGCTTGAGCA TCTGCTGGCC
GGGCGGCTCA ACCTGCTGCT GCACGGCGCG GGCGGCACCG GCCCGGAGAG CCTGACCTGC
CTGCCCGCTC CGGGGCCGGG CCGCCACCAG CTCGTCGAGG TGACCTCCGG CGGCCTGCGC
CGCTGGGACC GCGACCGGGC CGCCCTCCTG CCCGCCGAGG AGCTGTCACG CGCCTGGCAC
GGGACGGGGC TGACGTTCTC CCCCGGGGGC GGCGCGCCCG CCGCCCTGCC GCCGGCGGCT
CCCCCCGCGG CGGCCGAGCC CAAACGGGCG GCCGCCCCGG CCATGCTGCT GCTGGACCGG
ATCGCCGAGG TCTGCGAGGC CCGGCACGAG CGGGTCAAGA TCAGGAGGGT GGTCGGCGAC
GTCCCGCAGC TTCTGGTCAC CTATCCGGAG GACGGCTTCG TCCGGCAGCT CAGGATAGGC
GCCCACGCCG GCGAGCTGAC CGGGCAGGAC GTGGAGGCCT TCGCCGGGCA GGTGCACGCC
TCCGGGCTGG AGCACGGCGC CGAGCTGGTC TACCAAGGGC CGCCGCCCGC GCAGGCGCTG
CGCGAGGAGA TGACCCGGCG CGGGCTGCGG CTGCGCAGCT TCACCGAGTT CCAGGGACTG
CTCGACCTGA CCGGATACGT GGCCGACCAG ACAGCGCGGC TGCGCGGGGA CCGCCGCTAC
CCGCAGGGGC TGTACGTGCC GCAGCGTTTC CGGGAGCTGG ACCGTCCCGA CCGGCGCGTC
CGGGAAGGGC TCACCGACGA GCTGATGCGG TTGCTGGCCA CCGACCACGG CCGGTTCCTG
CTGGTGCTGG GCGACTTCGG GCACGGCAAG ACCTTCGCCC TGCGCGAGCT GGCCCGGCGG
ATCCCGGTGG AGCTGCCTCA CCTGGTGCCG ATCCTGATCG AGCTGCGCGC GCTGGACAAG
GCGCACTCGG TGGACGGGCT GGTCGCCGCG CACCTGGCCA ACCACGGCGA GGACGTCATC
GACCTGAAGG CCTTCCACTA CATGCTCCGC CAGGGCCGCA TCGTGCTGCT GTTCGACGGG
TTCGACGAGC TGGTGACCCG GGTGACCTAC GACCGGGCCG CCGACCATCT GGACACGCTG
CTGCAGGCCG CCGAGGACAA GGCGAAGATC GTCGTGGCCA GCCGTTCCCA GCACTTCAAG
TCCAGCGCCC AGGTGCTCAC CAAGCTCGGC GAGAAGGTGG GCCTCCTGCC GCAGCGGCGC
CTGCTCAGCG TGGAGGACTT CACCGGCCCG CAGATCCGCT CCTACCTCGT CAACCGCTAC
GACGGCGACG AGGGCGCCGC CGGAGACCGG CTCTCGCTGA TGAGCGACAT CGAGGACCTG
CTGGGCCTGG CCAGGAACCC GCGCATGCTC AGCTTCATCG CCGACCTCGA CGACCAGCGC
CTGGCCACCG TCGCCAAGGC CCGGCACACC ATCAGCGCGG CGCTGCTGTA CGAGGAGATC
ATGGGCTCCT GGCTCGCCTT CGAGGAGCGC CGGGTGCGGG ACGTGCCGGG CGCGCCGGCC
GGGCTGCGCG CCGGGGAGCT GCGGCAGGCG GTGACCACGC TGGCGCTGCG GCTGTGGGAG
AGCGGGGAGG CCTACCTGCG GCCGGCGGAG CTGGCCGAGA TCGCCGAGAC GCTGACCGGC
CTGGCGGACG GGCAGCTGTC GGGCCAGCAG ACCGCGCACG CGGTGGGGAC CGGCAGCCTG
ATGGTCCGCA CCGAGGAGGG GCTGTTCGGG TTCATCCACT CGTCGGTCAT GGAGTGGCTG
GTCGCCCGGC ACATCGCCAT GACCTTCGCC GACCCGGTGA CGCTCGCGCG CAGGCCGCTG
TCTCAGCTCA CGGTGGACTT CCTGTGCGAC CTGGCCGACG TGCGCGCCTG CCAGGCCTGG
GCGGCGGACG TTCTCGCCGA CCCCGGCGCC GACGACGTCT CCCGGACCAA CGCCATCAAG
ATCACCACCC GGTTGCGCAC CCCGGCCATG ACCGACCTGC GCGGCGCCAA CCTGCGCGGC
GAGGACCTGT CCGCGCGCGA CCTGCGGGAG GTCGACCTCA CCGGGGCCAA CCTGACCGAC
GCCACCCTGG TCGGGACCGA CCTGTCGCGC GCCGTGCTCC GTGACGCCCG GCTGACCGGA
GCCCGGCTGG ACGAGGCCCG GCTCACCGGC GCCGACCTGC GCGGCGCCGA CCTGACGCGG
GCCCGGCTGG CCAGGGCGGA CCTGCGGGAC GTGGCGGTGG CGGGCAGCCG CTGGCAGCGG
GCGGCGCTGA TCGACGTCAC CGGCACGGTG GCCGGTGTCC CCGAACTCCG CGGCGCCGCG
ATCGCACCTG GCCAGCCGGT GGAGGTCCAG CTGGCCCCGG CCGCGATCGG CGTGCCGTAC
GGCTACCACT TCCAGACCAG CAGGCTGCCC GAGCCCGTCG CCTACAGCCC CGACGGCGAG
ACCCTGGTGA TCGGCGGCGA CGACGGCGGG GTGCTGCTCT GCGACAGCGC CACCGGCCTG
CCGGTCAGAA ACCTGCAGGG TCATCGGGGC CGGGTCTACG CCGTCACCTT CAGCCGCTCG
GGCGACCTGC TCGCCACCGG GGCGAGCGAC GGCACGGTCC GGCTCTGGGA CCCGGTCACC
GCGAGCGCCT CCCACGTGCT CGCCGGGCAT CGCGACGGCG TGTGGCCGGT GGTGTTCAGC
CCCGCCGGGC GGCTGATCGC CGCGGGCGGC GCCGACGGCA CCGTACGGAT CTGGGACACC
GCCACCGGCC TGCCGTACCG GGAGCTCCCC GGCCACCTGG CGCCGATCTA CACCGCGACG
TTCGACGCGG GCGGCGACAC GCTCGTCACC GGCGACGCGG GCGGGACGGT ACGGATGTGG
GACGTGCGGA CCGGCGAGAT CGTCCGGACC CTGGACGGGC ACCGCGGCTC CGTCTACCGC
ATCGCCTACG ACCCCGGCGG CACGCTGCTG GCCGCCGGCG ACCGCGAGGG CGTGGTGCGG
ATCTGGGATC CCCGGGACGG GCAGGTCCTG CACGCGCTGA CCGGGCACAC GGGCAGCGTC
TACGCGCTGT CCTTCGCGCC CTCCGGCCGG CTGCTGGCGA CCGGCGACAC CGACGGCGCG
ATCCGGCTGT GGGACCCGGT CTCGGGCGCC TCGCGCGGCA TGCGGACGGG CCATCGGGCG
GCCGTCTACC AGGTCGGCTT CAGCCCGGAC GGCTCGCTGC TGGCCAGCGC CGACTCCGAC
GGCGCGGTCC ACCTGCACGG GGTCGCCGAG GAGCGCGAGC GGGTGGAGCT GGCCGGGCAC
CGCGGCTCCG TCTGGCCGTT CGCCTTCCGG CCCGGCGGCG GCCAGCTGGC CACCAGCAGC
AACGACGGCA CCGTCCGGCT CTGGGACACC GCCACCGGGC AGTGCCGGCG CGTCCTGCGC
GGTCACGGCC GCAAGATCAC TTCAGTGCGG TTCAGCGCCG ACGGGAGCAT GCTGGCGACC
AGCGGCAACG ACGGGGTCGT GCGGATCTGG GAGCCGCGCA CGGGCCGCCG GCTGCGGGAG
CTCACCGGGC AGGCCGACCG GCTCATCTCC GCCGCCTTCA GCCCCGCCGA CCCCACGATC
GCCGCCGCGA GCAACGACGG CGGGGTGCAC TTCTGGAACG CCGCCACCGG CGACTACGAG
CGCGAGCTGG ACGTCGAGAC CGACCACGTG TGGGCTGAGG CGTTCAGCCC CGGCGGGGAC
CACCTCGCCA CCGCCAACGA CGACGACAGC GTCCGCGTCT GGTACCGGGC GAGCGGCCGC
CAGGTCGTCA AGCTCGCCGA CCACCACGGC CGGGTCCGCT CCATCGCCTT CAGCCCCGAC
GGCCGCCACG TGGCCACCGG CTGCGACGAC CGGCTGGCGC GGGTCTGGGA GGTCGAGACC
GGCACGTGCG TGGCGATCCT GGAGGGCCAC ACCGACCGGG TGTACTCGGT GGTCTTCAGC
CCCGACGGAA GCACGCTGGC CAGCGCCGGC AACGACGGCG ACGCCCGCGT GTGGGACCTG
CGGCCGGATC CGCGGCCGGG CCACCCGTGG CGCCCCAGGC TGCTCCACAC CCTCACCCGC
CACCCCGGAC GGCTGTGGAC CGTCGCCTTC AGCCCGGACG GCTCGCTGCT GGCCACCGGG
GGCGACGACC CGGCGGTGCG GCTCTGGGAC GCCCGTACCG GCCGGCACCT GCACGCGCTG
ACCGGCCACA CCCGCCGGAT CTGGTCGCTG GCCTTCGCCC CCGCCGGGGA CCTGCTGGCC
AGCGCGGGCG ACGACGGCGT GGCGATCCTC TGGGAGCTCC ACCCCGGTAC GGCTCCCGCC
CAGCGGGTGG CCCTCCTCGG CCTGCCGGAG GGATGGGCGG CGATCGCGCC GGACGGCCGC
TACAAGCTGG CGGGCGAGGT GGCAGGCCAG TTCTGGTACG TCGTCGGGAC CCGCAGGTTC
GAGCCCGGAG AGCTGGACGC CTACCTGCCC GCGATCGGGC AGATCGCGCT GGACGCGGAG
TTCTGA
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| Protein sequence | MARDDRPVDI FVSYSPADER WASWIAWELE AAGYRTMIQA WDFVPGTQFI EFMDRGVSEA
ALVVAVLSRN YLKSRWGRME WQAALRADPD NPSNKLVTIR LEDCPLEGLL STITWVDLVG
VADPDQARAL LLNRIGQALA GRAKPLDRPS FPNGPATIPG EVLPAPSGRG QARARRTPVA
PPAYPAGPSA HVPRESITLL HVAGPRFGRG LADEDEPLTA EELQPRIWAD LTRLRDAGLP
RPDLMVVTGD LTESGGRREF GEAAAFLTGL RVLLGLEPQR LIVVPGPRDI TKAASRAYFS
NCEADDVRPQ PPYWPKWRHF TGLFEELYLG LDGPEFDSAQ PWTLFAVPDL KVVVAGLNST
MAMSHREEDR YGSVGEAQAA WFAERLRPFE EAGWLRIGAV AHPPAPAHLR DTSTLEHLLA
GRLNLLLHGA GGTGPESLTC LPAPGPGRHQ LVEVTSGGLR RWDRDRAALL PAEELSRAWH
GTGLTFSPGG GAPAALPPAA PPAAAEPKRA AAPAMLLLDR IAEVCEARHE RVKIRRVVGD
VPQLLVTYPE DGFVRQLRIG AHAGELTGQD VEAFAGQVHA SGLEHGAELV YQGPPPAQAL
REEMTRRGLR LRSFTEFQGL LDLTGYVADQ TARLRGDRRY PQGLYVPQRF RELDRPDRRV
REGLTDELMR LLATDHGRFL LVLGDFGHGK TFALRELARR IPVELPHLVP ILIELRALDK
AHSVDGLVAA HLANHGEDVI DLKAFHYMLR QGRIVLLFDG FDELVTRVTY DRAADHLDTL
LQAAEDKAKI VVASRSQHFK SSAQVLTKLG EKVGLLPQRR LLSVEDFTGP QIRSYLVNRY
DGDEGAAGDR LSLMSDIEDL LGLARNPRML SFIADLDDQR LATVAKARHT ISAALLYEEI
MGSWLAFEER RVRDVPGAPA GLRAGELRQA VTTLALRLWE SGEAYLRPAE LAEIAETLTG
LADGQLSGQQ TAHAVGTGSL MVRTEEGLFG FIHSSVMEWL VARHIAMTFA DPVTLARRPL
SQLTVDFLCD LADVRACQAW AADVLADPGA DDVSRTNAIK ITTRLRTPAM TDLRGANLRG
EDLSARDLRE VDLTGANLTD ATLVGTDLSR AVLRDARLTG ARLDEARLTG ADLRGADLTR
ARLARADLRD VAVAGSRWQR AALIDVTGTV AGVPELRGAA IAPGQPVEVQ LAPAAIGVPY
GYHFQTSRLP EPVAYSPDGE TLVIGGDDGG VLLCDSATGL PVRNLQGHRG RVYAVTFSRS
GDLLATGASD GTVRLWDPVT ASASHVLAGH RDGVWPVVFS PAGRLIAAGG ADGTVRIWDT
ATGLPYRELP GHLAPIYTAT FDAGGDTLVT GDAGGTVRMW DVRTGEIVRT LDGHRGSVYR
IAYDPGGTLL AAGDREGVVR IWDPRDGQVL HALTGHTGSV YALSFAPSGR LLATGDTDGA
IRLWDPVSGA SRGMRTGHRA AVYQVGFSPD GSLLASADSD GAVHLHGVAE ERERVELAGH
RGSVWPFAFR PGGGQLATSS NDGTVRLWDT ATGQCRRVLR GHGRKITSVR FSADGSMLAT
SGNDGVVRIW EPRTGRRLRE LTGQADRLIS AAFSPADPTI AAASNDGGVH FWNAATGDYE
RELDVETDHV WAEAFSPGGD HLATANDDDS VRVWYRASGR QVVKLADHHG RVRSIAFSPD
GRHVATGCDD RLARVWEVET GTCVAILEGH TDRVYSVVFS PDGSTLASAG NDGDARVWDL
RPDPRPGHPW RPRLLHTLTR HPGRLWTVAF SPDGSLLATG GDDPAVRLWD ARTGRHLHAL
TGHTRRIWSL AFAPAGDLLA SAGDDGVAIL WELHPGTAPA QRVALLGLPE GWAAIAPDGR
YKLAGEVAGQ FWYVVGTRRF EPGELDAYLP AIGQIALDAE F
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