Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2949 |
Symbol | |
ID | 8666235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3206319 |
End bp | 3210824 |
Gene Length | 4506 bp |
Protein Length | 1501 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Glutamate synthase (ferredoxin) |
Protein accession | YP_003338647 |
Protein GI | 271964451 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.341665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCTG CCCACCTCGG CTTTCCCGAG CCCCAGGGCC TCTACCACCC CTCGCACGAG CACGACGCCT GTGGCGTCGC CATGGTCGCG GACGTGGCCG GCCGCCGCAG TCACGACATC GTCGCGAAGG CCCTGACGGC GCTCTGCAAC CTCGACCATC GGGGGGCCCA GGGTAGCGAA CCGGACACCG GCGACGGCGC CGGGATCCTG ACGCAGATCC CCGACACGTT CTTCCGCGCC GTGACGGACT TCCCGCTGCC CGTGGCGGGC TCCTACGCCG TCGGCACGGC CTTCCTGCCC GCCGACCCCG AGGCCCGCGC GATCGGCGTG CGGATGATCG AGGAGATCGC GGCGGAGGAG GGCCTGACGG TCCTCGGCTG GCGCGACGTG CCGACCGACC CCACGCTGCC CGGGCCGAGC GCCCGCGCGG TGATGCCGTT CTTCCGGCAG ATCTTCGTGG CCTCGCCGCA GGGCGAGAGC GGCCTGGAGC TGGACCGGCT GGCCTTCTGC CTGCGCAAGC GGGCCGAGCA CGAGGTGGAC GTCTACTTCC CCTCGCTGAG CGCCCGGACG ATCGTCTACA AGGGCATGCT CACCCCGCCG CAGGTCGAGC CGTTCTTCCC CGACCTGAGC GACGAGCGCT ACGAGACCGC GATCTCGCTG GTCCACTCGC GCTTCTCCAC CAACACCTTC CCCTCCTGGC CGCTGGCGCA CCCCTACCGC TACGTCGCCC ACAACGGCGA GATCAACACG GTCAAGGGCA ACCGCAACTG GATGCGGGCC CGCGAGGCCA TGCTGGAGAC CGCGGCCATC CCGGGCGAGC TGTCGCGGCT CTTCCCGATC TGCGACCCCG ACGGCTCCGA CACCGCCTCC TTCGACGAGA CGCTGGAGCT GCTCCACCTC GCCGGGCGCA AGCTGCCGCA CGCGGTGCTG ATGATGATCC CCGAGGCGTG GGAGAACCAC ACCGAGATGG ACCCCGCGCG GCGGGCGTTC TACGAGTTCC ACTCCACGCT GCTCGAGGCC TGGGACGGCC CTGCCTCGAT CACCTTCTCC GACGGCACCC TGGTCGGCGC GGTCCTCGAC CGCAACGGCC TGCGCCCGGG ACGGTTCTGG GTCACCAGGG ACGGCCTCGT CGTGCTGGCC TCCGAGGCCG GTGTGCTCGA CATCGCGCCG CAGGACGTGG TCCGCAAGGG CCGCCTGCAG CCGGGCAAGA TGTTCCTGAT CGACACCGAG CTCGGCAAGA TCATCGAGGA CGACGAGATC AAGGCGGAGC TCGCCGCCGA GCTGCCCTAC GCCGAGTGGC TGCACGCCGG TCTGGTCCGC TTCGAGGAGC TGCCCGCCCG CTCGCGTGAG ATCCCGACCC ACGAGGCGCT GATCAAGCGT CAGCAGACCT TCGGCTACAC CGAGGAAGAG CTGCGGATCA TCCTGTCGCC GATGGCCAAG GTGGGCGCCG AGCCGATCGG CTCGATGGGC ACCGACACCC CGGTCGCGGT GCTCAGCGAG AAGCCCCGGC TGCTGTTCGA CTACTTCAGC CAGCTTTTCG CGCAGGTCAC CAACCCGCCG CTGGACGCCA TCCGCGAGGA GCTCGTCACC TCCCTGGCCA GCACCCTCGG CCCCGAGGGC AACCTGCTCG ACCCGGGCCC GGCCTCCTGC CGCCAGCTCG TGCTGCCGTA CCCGGTGATC GACAACGACG AGCTCGCGAA GATCATCCAC ATCAACGACG AGGGCGCGCT GCCGGGCTTC CACCCGCGCG TCGTCTCCGG CCTGTACGAG GTCCGGGGCG GCGGTGAGGC GCTGCTGCAC CGCCTTGAGG AGATCTGCGC CGAGGTCTCG GCGGCGATCG AGGGCGGGGC GCGCGTCATC GTGCTCTCCG ACCGGGGCTC CTCCGACGTG CTGGCGCCGA TCCCGTCGCT GCTGCTCACC GGCGCGGTCC ACCACCACCT GATCGCCGAG AAGACCCGCA CCCGGGTCGG CCTGGTCATC GAGACCGGCG AGGCCCGCGA GGCCCACCAC ATGGCGCTCC TCGTCGGCTA CGGCGCGGGC GCGGTCAACC CCTACCTCGC CATCGAGACC GTCGAGGACA TGGTCGACTC CGGCGTCCTG GCGATCGACA AGCACAAGGC CGTGCGCAAC CTCATCAAGG CGTACGGCAA GGGCGTGCTG AAGGTCATGT CCAAGATGGG CGTGTCCACC GTCGCCTCCT ACACCGGCGC GCAGATCTTC GAGGCGCTCG GGCTCGGCCA GGACGTCATC GACGCCTGCT TCACCGGGAC GACCTCCCGC CTGGGCGGCA TCGGCTTCGA CGTCCTGGCC CAGGAGGTCG CGCTCCGCCA CGGGCGGGCC TACCCGCGGG CCGAGAACGC CCACCGCCGC CTGGAGGTCG GCGGGGAGTA CCAGTGGCGC CGCGAGGGCG AGCCGCACCT GTTCAACCCC GAGACCGTCT TCAAGCTGCA GCACGCCACC CGCTCGCGCC GCTACGAGAT CTTCAAGGAG TACACCGGCC TGGTGGACTC CCAGGCCGAG AAGCTGATGA CGCTGCGCGG CCTGTTCAAG TTCAGGGACG GCGTCCGCGA GCCGGTCCCG ATCGACGAGG TCGAGCCGGT CTCCGAGATC GTCAAGCGGT TCTCCACCGG CGCGATGTCC TACGGCTCCA TCTCGATGGA GGCGCACGAG ACCCTCGCTA TCGCGATGAA CCGGCTGGGC GGCAAGTCCA ACACCGGCGA GGGCGGCGAG GACCCCGAGC GGCTCTACGA CCCCGCCCGC CGCTCCGCCA TCAAGCAGGT GGCCTCGGGC CGCTTCGGCG TGACGTCGGA GTATCTGGTC AACGCCGACG ACCTGCAGAT CAAGATGGCC CAGGGCGCCA AGCCCGGCGA GGGCGGCCAG CTGCCCGGCC ACAAGGTCTA CCCGTGGATC GCCAAGACCC GGCACTCCAC CCCGGGCGTC GGCCTCATCT CGCCGCCGCC GCACCACGAC ATCTACTCCA TCGAGGACCT CGCCCAGCTC ATCCACGACC TGAAGAACTC CAACCCGGTC GCCCGCGTGC ACGTCAAGCT CGTGGCCGAG GTCGGCGTCG GCACGGTCGC GGCGGGCGTG TCCAAGGCGC ACGCCGACGT GGTGCTCATC TCCGGCCACG ACGGCGGCAC CGGCGCCTCC CCGCTGACCT CGCTCAAGCA CGCGGGCGCG CCCTGGGAGC TCGGCCTGGC CGAGACCCAG CAGACACTGC TGCTCAACGG CCTGCGCGAC CGGATCGTGG TGCAGGTGGA CGGCCAGCTC AAGACCGGCC GCGACGTGGT CGTCGCCGCG CTGCTCGGCG CGGAGGAGTA CGGCTTCGCC ACCGCCCCGC TGGTCGTCTC CGGCTGCGTG ATGATGCGCG TCTGCCACCT GGACACCTGC CCGGTCGGCG TCGCCACCCA GAACCCCGAG CTGCGCAAGC GGTTCACCGG CAAGCCCGAG TTCGTGATCA ACTTCTTCGA GTTCATCGCC GAGGAGATCC GCGAGCACCT CGCCGCGCTG GGCTTCCGCA GCCTCGACGA GGCCATCGGC CACGCCGAGC TGCTGGACAC CACCTCGGCC GAGAACCACT GGAAGGCCGC GGGCCTGGAC CTGGCGCCGA TCCTGCACCA GCCGGAGCTG CCCGAGGGCA CCGCGCTCCG CCGTACGCAG GAGCAGGACC ACGGGCTGGA CAAGGCGCTG GACCACACGC TGATCCAGCT CGCCGAGGGC GCGCTGGACC ACGGCCGGCG GGTCACCCTG GAGCTGCCCA TCCGCAACGT CAACCGCACG GTCGGCACCA TGCTCGGCCA CGAGGTGACC AGGCGGTACG GCGGAGCGGG TCTCCCCGAC GACACCATCG AGGTCCGGTT CACCGGCTCG GCGGGCAACT CCTTCGGCGC CTTCGTGCCC CGGGGCGTCA CGCTGCGGCT GACCGGCGAC GCCAACGACT ACCTCGGCAA GGGCCTGTCG GGCGGCCGGA TCACGGTCCA GCCGCACGAC GAGGCGCCGC TGGAGGGCCA CATCATCGCC GGCAACGTCG GCCTGTACGG CGCGACCTCC GGCGAGGTGT TCGTCCGCGG GGTCATGGGG GAGCGGTTCT GCGTCCGCAA CTCCGGCGCC ACCGCGGTCG TCGAGGGCGT CGGCGACCAC GGCTGCGAGT ACATGACGGG CGGCAAGGTG GTCGTCCTCG GCCCGACCGG CCGCAACTTC GCGGCGGGCA TGTCCGGTGG CGTCGCCTAC CTGCTCGACC TCAACCCGGC GCGGGTCAAC CGCGAGATGG TGGAGATCGA GTCGCTGGAC GAGGCCGAGT CCGAGACCCT GAGGGAGATC GTCGAGGCGC ACCTGACGGA GACCGGCTCC ACGGTCGCCA AGGCGCTCCT GACCGACTGG GACCCGGCCC GGTTCAGCAA GATCATGCCG ACGGACTACA AGCGGGTCCT GAGGGCCGCC GAGGCCGCGC GCCTCGAAGG CCGCGACATC GACGAGGCGG TCATGACCGC GGCGGTTCAG GGATGA
|
Protein sequence | MPAAHLGFPE PQGLYHPSHE HDACGVAMVA DVAGRRSHDI VAKALTALCN LDHRGAQGSE PDTGDGAGIL TQIPDTFFRA VTDFPLPVAG SYAVGTAFLP ADPEARAIGV RMIEEIAAEE GLTVLGWRDV PTDPTLPGPS ARAVMPFFRQ IFVASPQGES GLELDRLAFC LRKRAEHEVD VYFPSLSART IVYKGMLTPP QVEPFFPDLS DERYETAISL VHSRFSTNTF PSWPLAHPYR YVAHNGEINT VKGNRNWMRA REAMLETAAI PGELSRLFPI CDPDGSDTAS FDETLELLHL AGRKLPHAVL MMIPEAWENH TEMDPARRAF YEFHSTLLEA WDGPASITFS DGTLVGAVLD RNGLRPGRFW VTRDGLVVLA SEAGVLDIAP QDVVRKGRLQ PGKMFLIDTE LGKIIEDDEI KAELAAELPY AEWLHAGLVR FEELPARSRE IPTHEALIKR QQTFGYTEEE LRIILSPMAK VGAEPIGSMG TDTPVAVLSE KPRLLFDYFS QLFAQVTNPP LDAIREELVT SLASTLGPEG NLLDPGPASC RQLVLPYPVI DNDELAKIIH INDEGALPGF HPRVVSGLYE VRGGGEALLH RLEEICAEVS AAIEGGARVI VLSDRGSSDV LAPIPSLLLT GAVHHHLIAE KTRTRVGLVI ETGEAREAHH MALLVGYGAG AVNPYLAIET VEDMVDSGVL AIDKHKAVRN LIKAYGKGVL KVMSKMGVST VASYTGAQIF EALGLGQDVI DACFTGTTSR LGGIGFDVLA QEVALRHGRA YPRAENAHRR LEVGGEYQWR REGEPHLFNP ETVFKLQHAT RSRRYEIFKE YTGLVDSQAE KLMTLRGLFK FRDGVREPVP IDEVEPVSEI VKRFSTGAMS YGSISMEAHE TLAIAMNRLG GKSNTGEGGE DPERLYDPAR RSAIKQVASG RFGVTSEYLV NADDLQIKMA QGAKPGEGGQ LPGHKVYPWI AKTRHSTPGV GLISPPPHHD IYSIEDLAQL IHDLKNSNPV ARVHVKLVAE VGVGTVAAGV SKAHADVVLI SGHDGGTGAS PLTSLKHAGA PWELGLAETQ QTLLLNGLRD RIVVQVDGQL KTGRDVVVAA LLGAEEYGFA TAPLVVSGCV MMRVCHLDTC PVGVATQNPE LRKRFTGKPE FVINFFEFIA EEIREHLAAL GFRSLDEAIG HAELLDTTSA ENHWKAAGLD LAPILHQPEL PEGTALRRTQ EQDHGLDKAL DHTLIQLAEG ALDHGRRVTL ELPIRNVNRT VGTMLGHEVT RRYGGAGLPD DTIEVRFTGS AGNSFGAFVP RGVTLRLTGD ANDYLGKGLS GGRITVQPHD EAPLEGHIIA GNVGLYGATS GEVFVRGVMG ERFCVRNSGA TAVVEGVGDH GCEYMTGGKV VVLGPTGRNF AAGMSGGVAY LLDLNPARVN REMVEIESLD EAESETLREI VEAHLTETGS TVAKALLTDW DPARFSKIMP TDYKRVLRAA EAARLEGRDI DEAVMTAAVQ G
|
| |