| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2894 |
|---|
| Symbol | |
|---|
| ID | 8666180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3152539 |
|---|
| End bp | 3153759 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | multidrug-efflux transporter |
|---|
| Protein accession | YP_003338593 |
|---|
| Protein GI | 271964397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.595534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACATCT CGGCAAGCCG GGCCGCGGAC GGAGCACGTC CGCGGTCCCG GCTCTCCTGG
GCGGTCCCCG GGAACGTGCT CGCGCTCGGG GCGGTCAGCC TGGTCACCGA CATCTCCTCG
GAGATGGTCA CGGCCGTGCT CCCGCTCTAC CTGACGCTCT CCCTCGGGCT CAACCTGCTG
CAGTTCGGCC TGCTGGACGG GCTCTCCTTC GGGGTGACGG CGCTGGTCCG CCTGGCCGGC
GGCAACCTCG CCGACCGGTG GCAGCGGCGC AAGCTGGTCG CCGGCATCGG ATACGGGCTG
TCGGCGCTCT GCAAGCCGGC CCTGCTCGCG GCCGGCGGCT CGGTCGCGGC GCTGGGCGCG
GTGATCGCCG TGGACCGGAC CGGCAAGGGG CTGCGGACGG CCCCGCGTGA CGCGCTGATC
TCGCTGAGCG TCCCGCCGGA CGGGCTCGGG CAGGCGTTCG GCGTGCACCG CGCCATGGAC
ACCTTCGGCG CGCTGCTCGG CCCGCTGGTG GCGTTCGCCG TCCTGATGGG CACCGGCGGC
GCCTACGACG CGGTGTTCGT GGTCAGCTTC TGCGTGGCCG TGCTCGGCGT GCTGCTCATG
GTCATGTACG TCCGCGACCG GCGCATGCCG CTGCCGGGCC CGCGGTCGGC GACCTCGCCG
CGCGCGGCGT TCGGGCTGCT GCGCGAGGCG GCGTTCCGGC GGGTGTGCGT GGTGGCCGCG
GCCCTGGGCC TGGTCACGCT CAGCGACGCG TTCGTCTACC TGCTCCTGCA GAAGCGCGGC
GGGTTCGGCG CCGAGTACTT CCCGCTGCTG CCGATCGGCA CGGCCGCCGT CTACCTCCTG
CTGGCCGTGC CCGTCGGCCG CCTCGCCGAC CGGGTGGGCC GTATCCCGGT CTTCCTGGCC
GGGCACGTGG CGCTGGTCGC CGCCTACCTC GTGCTCATCG GACCGGGGTG GCTCGTGGCG
GTGCTGGCCC TGCAGGGGGT CTTCTACGCC GCGACCGACG GCGTGCTGAT GGCCGTGGCG
GGGCCGATGC TCCCCGCCCA CCTGCGTACC AGTGGCCTGG CCCTGCTCCA GACCGGCCAG
GCGACCGCCC GGCTGTTCTC CTCGGTCCTG TTCGGCGCCG TCTGGACGGT GTGGGGGAGC
ACGCAGGGGC TCGCCGCCAT GGCCGCCGGG CTCGCGGTGT GCGTGCTCGG CGCCTGGTCC
GTCGTGAGGA GGCACGCATG A
|
|---|
| Protein sequence | MYISASRAAD GARPRSRLSW AVPGNVLALG AVSLVTDISS EMVTAVLPLY LTLSLGLNLL
QFGLLDGLSF GVTALVRLAG GNLADRWQRR KLVAGIGYGL SALCKPALLA AGGSVAALGA
VIAVDRTGKG LRTAPRDALI SLSVPPDGLG QAFGVHRAMD TFGALLGPLV AFAVLMGTGG
AYDAVFVVSF CVAVLGVLLM VMYVRDRRMP LPGPRSATSP RAAFGLLREA AFRRVCVVAA
ALGLVTLSDA FVYLLLQKRG GFGAEYFPLL PIGTAAVYLL LAVPVGRLAD RVGRIPVFLA
GHVALVAAYL VLIGPGWLVA VLALQGVFYA ATDGVLMAVA GPMLPAHLRT SGLALLQTGQ
ATARLFSSVL FGAVWTVWGS TQGLAAMAAG LAVCVLGAWS VVRRHA
|
|---|
| |