| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2868 |
|---|
| Symbol | |
|---|
| ID | 8666154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3118479 |
|---|
| End bp | 3119876 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
|---|
| Protein accession | YP_003338568 |
|---|
| Protein GI | 271964372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0485127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCTGCG TCGCGGGTCT GGGAGTCTCC GGCACGGCCG TCGCCCGCGC CATGGCCGCC
CGGGGCGAGA AGGTGGTCGT CCTGGAGGGC CGGGACGGGG AGCGGGCCAG GGCGACCGCC
GCGGAGCTGG CCGGGATCGG CGTCGAGGTC CGCTTCGGCG AGCCGGTCGA GCCGCCCGCC
GGCACCTCCC TCATCGTCGC CACCGGCTGG CCGCCGCACC ATCCGCTGCT GGTCGCGGCG
GCCGAGGCCG GGGTGGAGGT GATCGGCGAG GTCGAGCTGG CCTGGCGGCT CCGCCCGGCG
GGCGCCGCGC CGTGGCTGGC GCTGACCGGC ACCAACGGCA AGACCACCGT GGTCCGGATG
CTCACCTCGA TGCTCACCGC GGCCGGGCAC GCGGCGCTCG CGGTCGGCAA CGTCGGCACC
CCCGTCGTGG AGGCCGTCAC CGGCCCCGCC GACGTGCTGG CCGTGGAGCT GTCCAGCTTC
CAGCTCCACC GCTCGCCCAG CCTCGCCCCG CACACCGCGG CCGTGCTCAA CGTCGCCCCC
GACCATCTCG ACTGGCACGG CTCCCTGGAG GAGTACGCCC GGGTCAAGGG GGAGATCTTC
ACCCGGGCCG GGACGGTCGT CCACAACGCC GACGACGAGT GGTCGGCCCG CCTGGCGGCG
CCGTACGACG GGGGCACGGG CGCGCGCAGC GTCGGCTTCA CCCTCGGCGT GCCGGCGCCC
GGCCAGGTCG GCGTGGTCGA AGACCTGCTG GTGGACCGGG CGTTCGTGGC CGACCCGGCG
CGCCACGCCG AGGAGCTCGC CTCCTTCGAC GACATCCGGC CGTTCGCACC GCACAACGTG
GCCAACGCGC TCGCCGCCGC CGCCATGGCC CGCTCCTACG GGGTGCCCGC GGAGGCCGTA
CGGCAGGGCC TGCTGGACTT CGTCCCCGAC CCGCACCGGA TGGCGCGGGT CGCGCGGGTC
GGCGAGGTCG ACTACGTCGA CGACTCCAAG GCCACCAACC CGCACGCCGC CGCCGCCTCG
CTCGCCGCCT ACCCCTCGAT CGTCTGGATC GCCGGCGGGC AGCTCAAGGG CGCCGACGTG
GACGATCTGG TACGGCGGGC CGCGCCCCGG CTGCGCGGCG CGGTGCTGCT GGGCGCCGAT
CGCGAGCGGA TCCGGCAGGC TCTGGCGCGA CACGCCGCGA ATGTCCCGGT GGTGGAGGTG
GCCGGGCAAG ACACTGGGGT CATGGACCGT GTCGTCATCG AAGCCGCGAG GCTCGCCGCC
CCCGGGGACA CCGTGCTGCT GGCCCCGGCG GGGGCCTCGC TGGACATGTT CCCCGGCTAC
GGGGCCCGGG GGAAGGCCTT CGCCCGGGCC GTGCTGGAGC GTCTGGACGG CTCCCAGGGC
GGTGCCGGGG ACGCATGA
|
|---|
| Protein sequence | MICVAGLGVS GTAVARAMAA RGEKVVVLEG RDGERARATA AELAGIGVEV RFGEPVEPPA
GTSLIVATGW PPHHPLLVAA AEAGVEVIGE VELAWRLRPA GAAPWLALTG TNGKTTVVRM
LTSMLTAAGH AALAVGNVGT PVVEAVTGPA DVLAVELSSF QLHRSPSLAP HTAAVLNVAP
DHLDWHGSLE EYARVKGEIF TRAGTVVHNA DDEWSARLAA PYDGGTGARS VGFTLGVPAP
GQVGVVEDLL VDRAFVADPA RHAEELASFD DIRPFAPHNV ANALAAAAMA RSYGVPAEAV
RQGLLDFVPD PHRMARVARV GEVDYVDDSK ATNPHAAAAS LAAYPSIVWI AGGQLKGADV
DDLVRRAAPR LRGAVLLGAD RERIRQALAR HAANVPVVEV AGQDTGVMDR VVIEAARLAA
PGDTVLLAPA GASLDMFPGY GARGKAFARA VLERLDGSQG GAGDA
|
|---|
| |