| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2866 |
|---|
| Symbol | |
|---|
| ID | 8666152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3115986 |
|---|
| End bp | 3117383 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| Protein accession | YP_003338566 |
|---|
| Protein GI | 271964370 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00476658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGT TGCCGCTGGC CAGGATCGCC GAGATCACCT CGGGTGCCCT CGCGGGCATG
GCCGATCCCC GCGCGGTCGT GCGCGGTCCG GTCGTCATCG ACTCCCGTGC CGTCGAGCCG
GGGTCGCTGT TCGTCGCGAT CAGGGGAGAC CGGGTCGACG GGCACGACTT CGCCGCCCAG
GCCGTCGAGG CCGGGGCCGT CGCCGTGCTG GCGTCCAGGC CCGTGGACGC TCCCGCGGTC
GTCGTCGGCG ACACCGTGAC CGCCCTGGCC GACCTGGCCA CCGCGGTCTG CGCCGATCTG
CCGTCGACCA CGGTCATCGG AGTGACCGGA TCGGCGGGCA AGACCAGCAC CAAGGACCTG
CTGGCCCGCC TCACCGCCAG GATCGGTCCG ACGATCGCCC CGGTCGAGTC GTTCAACAAC
GAGATCGGCC ACCCGCTCAC GGTGCTGAAG GCCGGCGAGG ACACCCGCTA CCTGGTCCTG
GAGCTCAGCG CCAGGGACGC CGGCCACATC AGCCACCTGG CCCGCATCGC CCCGCCCAGG
ATCGGGGTGG TCCTCAACGT CGGCACCGCC CACCTGGGCG TCTTCGGCGG CAAGGACGCG
ATAGCCAAGG CCAAGGGCGA GCTGGTCGAG GCGCTGCCCG CCGACGGCGT GGCCGTGCTG
AACGCCGACG ACCCGCTGGT GGCCGCGATG GCCCGGCGCA CCGACGCCAG GGTCGCCTGG
TACGGCCGCG CCGAGAGCGC CGCGGTGCGG GCGGAGGGGG TGACCCTCGA CGACCGGGGC
CGCGCCGCCT TCACGCTGCG CACCCCGTCC GGGGCCGCCC CGGTCGTGCT CCGCCTGTAC
GGCGAGCACG CCGTGGAGAA CGCGCTCGCC GCCGCGGCGG CCGCCTACGA GCTCGGCCTG
CCGGTCGCCA CCATCGCCGA GGAGCTGTCG GAGGCCGAGC CCCGCAGCCG CTGGCGGATG
GAGGTCACCG ACAGGGCGGA CGGCGTCACC GTGATCAACG ACGCCTACAA CGCCAACCCC
GACTCCATGC GCGCCGCCTT CGGCGCCCTC GACGCGCTCG CGGGCGGCCG CCGCCGCTTC
GCGGTCATCG CCGCCCTGCG CGAGCTGGGC GAGGAGAGCG CGGCCCTGAA CGAGGGCGTG
GGCCGAATGG CGGCGGGGGC GGGCCTGGAG GGCCTGTTCG TCGTCGGGCC CGACGCCGGC
CCGGTCCTGG CCGGTGCCGG AGCCGCCGTG GACGGCGTCC CGTCCGCCAC CCGGGTCACG
CACGTCGCCG ACGCGCAGGA GGCGGCCGCC GCGCTGTCGG CGCTCCTGGT CCCCGGCGAC
GTGGTGCTGG TCAAGGGGCC GCGCGCGGCC GGCCTGGAGC GCGTGGCGGC GGCACTGGTG
GGAGGTGATC GCCGATGA
|
|---|
| Protein sequence | MIPLPLARIA EITSGALAGM ADPRAVVRGP VVIDSRAVEP GSLFVAIRGD RVDGHDFAAQ
AVEAGAVAVL ASRPVDAPAV VVGDTVTALA DLATAVCADL PSTTVIGVTG SAGKTSTKDL
LARLTARIGP TIAPVESFNN EIGHPLTVLK AGEDTRYLVL ELSARDAGHI SHLARIAPPR
IGVVLNVGTA HLGVFGGKDA IAKAKGELVE ALPADGVAVL NADDPLVAAM ARRTDARVAW
YGRAESAAVR AEGVTLDDRG RAAFTLRTPS GAAPVVLRLY GEHAVENALA AAAAAYELGL
PVATIAEELS EAEPRSRWRM EVTDRADGVT VINDAYNANP DSMRAAFGAL DALAGGRRRF
AVIAALRELG EESAALNEGV GRMAAGAGLE GLFVVGPDAG PVLAGAGAAV DGVPSATRVT
HVADAQEAAA ALSALLVPGD VVLVKGPRAA GLERVAAALV GGDRR
|
|---|
| |