Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2561 |
Symbol | |
ID | 8665847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 2788867 |
End bp | 2790717 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003338278 |
Protein GI | 271964082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.870774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGAG CCCCTGCGAC GGTCCGGCTC ACCCCCCGGA TGGCGCTGGG TCACGTCCGC ACGGCCGCCC GGCTGGCGCT GAAGGCGGCT CCCGGAAGCC TGGCCGGGCT GGTGGTCCTG ACGGTCGCGG GGGGACTGGC GCCGGTGGTG ACCGCGTGGC TCACCGGGCT GGTGCTGGAC GGTCTGGTCG GTGGCATGTC CGGCCCGGCG CTGGTCTGGC TGACTGTGGC GCTGGCCCTC GCCGGGATCG CCACCGTGGT CCTGCCCCGG CTGTCCCAGT ACGCCGAGTC GGAGCTGGGG CGGCGGGTGC GGGTCATCGC GGCGGACCGG CTCTACACCG CGATGAACCA CCGGTTGCGG GGCCTCGCCA GGTTGGAGGA CCCGCGCTTC CACGACCGGA TCCGGCTGGC GCAGCAGGCC GGTAGCACCG CGCCGGGCGA CCTGGTGAAC AGCGCGACCG GGATCGGGAA GAGCACGCTG ACCCTGGCCG GGTTCCTGGT CACCCTGCTA CTGATCAACC CGTGGCTGGT ACTGGCCGTG GGGGTCGCCG CGATCCCCAC CGTACGCGCG GAAGTCCTGC TGGGCCGGCG CCGGGTGGGG GCGATGTGGC GGATCGGCTA CGCCGAGCGG CGCCAGTACT TCTACGCGAA TCTGCTCAGC GCGCCACGGG AGGCCAAGGA GGTCCGGCTC TTCGGGCTCG GGGCTTTCTT CCGGGACCGG ATGCTCACCG AACTGCGGTC CGCCAACGCC ACCAACCGGG CCCTGGACCG GCGGGAACTG GGAGTGCAGA CCATGCTCGG CGTCCTGGGG GCCGCGGTCG CCGGCGGCGG GCTGGTCTGG GCGATCCAGG CCGCCCGGTC CGGACAGATG ACCGTGGGGA ACGTGATGGT GTTCGTGGCC GCGGTCGCCG GGGTCCAGGG TTCCCTCTCC GCGATCGTGG GGCAGTTGGG CGGCGCCCAC CGGGCGATGC TCATGCTGGA CCACTACCAC GTGGCGACCA CGATGGAATC GGACCTGCCG GTCCCCGCGT CCCCCGCCCC GGTGCCGGCG CTGGTGGCGG GCATCGAACT CCGGGACGTC TGGTTCCGGT ACGGCCCGGA CCGGCCGTGG GTGCTCCGCG GCATGAACCT CACCATCCCC GCCGGTCGGA CCACCGCGCT GGTCGGGTTG AACGGAGCCG GGAAGAGCAC GTTGGTGAAG CTGCTCTGCA GGCTTTACGA CCCCGTCCGG GGCCAGGTCC GCTGGGACGG GGTCGACCTG CGGGAGACCG ACCCGGCCGA ACTGCGGGAG CGGATCGGCA CGGTGTTCCA GGACTACGTG GAGTACGAAC TCTCCGCGGC GGAGAACATC GGCCTGGGTG ATCTGACCCA CCTCCAGGAC AGGGACCGGA TCGAGTCCGC CGCCCGGCAC GCCGGGGTGC ATCATGTGCT GGCCTCGCTG CCGAACGGCT ACGACACCAT GCTGACCCGG ATGTTCCTGG AGGGCGTCGA CACCGAGGGC CCTGAGACCG GGGTGCTGCT GTCCGGCGGG CAGGGGCAGC GGCTGGCGCT GGCCCGGGCC CTGCTACGGG ACGAGCGGGA TCTGCTCATC CTCGACGAAC CCAGTTCCGG CCTCGACGCC GAGGCCGAGG CCGAGATCCA CGCCCGGCTC CGGGAGCACC GCGCCGGCCG TACCAGCCTG CTGATCTCCC ACCGCCTGAA CACAATCCGC GAGGCGGACC AGATCGCGGT CCTCGCCGAT GGGAAAATCA CCGAATGCGG AAACCACGAC CAGTTGATCG CCGAGAACGG CGCCTACTCC CGGCTCTTCG CCCTGCAGGC CCAGGGCTAC GTCGAGACGG CGCCCCGGTG A
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Protein sequence | MSGAPATVRL TPRMALGHVR TAARLALKAA PGSLAGLVVL TVAGGLAPVV TAWLTGLVLD GLVGGMSGPA LVWLTVALAL AGIATVVLPR LSQYAESELG RRVRVIAADR LYTAMNHRLR GLARLEDPRF HDRIRLAQQA GSTAPGDLVN SATGIGKSTL TLAGFLVTLL LINPWLVLAV GVAAIPTVRA EVLLGRRRVG AMWRIGYAER RQYFYANLLS APREAKEVRL FGLGAFFRDR MLTELRSANA TNRALDRREL GVQTMLGVLG AAVAGGGLVW AIQAARSGQM TVGNVMVFVA AVAGVQGSLS AIVGQLGGAH RAMLMLDHYH VATTMESDLP VPASPAPVPA LVAGIELRDV WFRYGPDRPW VLRGMNLTIP AGRTTALVGL NGAGKSTLVK LLCRLYDPVR GQVRWDGVDL RETDPAELRE RIGTVFQDYV EYELSAAENI GLGDLTHLQD RDRIESAARH AGVHHVLASL PNGYDTMLTR MFLEGVDTEG PETGVLLSGG QGQRLALARA LLRDERDLLI LDEPSSGLDA EAEAEIHARL REHRAGRTSL LISHRLNTIR EADQIAVLAD GKITECGNHD QLIAENGAYS RLFALQAQGY VETAPR
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