Gene Sros_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2542 
Symbol 
ID8665828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2774185 
End bp2775018 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003338260 
Protein GI271964064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.259314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATC CCAAAGACCT CGATCCCACC ACGTCGCCGA TCGCGTTCTT CGGCTACGAG 
CTGCGCCGAT ACCGGCAGCA GGCCGGGCTG TCCCAGGGGA AGCTGGCCAG ACGGACCGGA
TTCGCGCTGG GCACGATCTC CATGGCGGAG ACCGGGCGGC GGCCTCCGAC CGAGGATTTC
GTGCGGAGGT GTGACGAGGC GCTCGGAGTC GAGGGAGCGC TCATCCGGAT CAAGGAGATG
ATGGACAACG TCGCAGCCCG GTTGCCGGCC TGGTTCCGCC CCTGGGTGGA GGTCGAACAG
GCGGCTGACA GTCTGCGGAC CTGGGAGCCG CTTCTCGTGC CGGGGCTGCT CCAGACAGCG
GACTACGCGC GGGTGCTCTT CAACGGTGAG CCTCGCGCCT CGGCAGAGCG GACCGAGCTG
GATGTGACCG CCCGGCTAGA GCGGCAGCAC GTCCTGGAGC GGGAGAACGC GCCCATGCTC
TGGGTCGTCA TCGATGAGGG TGTGCTCATC CGCCGCATCG GTGACGACAC GACCATGGCA
GCACAGATGG ATCATCTTCT CGATGCTGGA CATATGCCGC ATGTCACCAT TCAGGTCCTG
CCTTTCGGGT CGGGCAGCAC GGTCGGTCTT TTGGGCGGTT TTGTCATTGC GCAGGTCCGA
GGGCTCGCCA ATACTGTCTA CATGGAGTCG GCTGGCCAGG GCCAGGTCAC CGACCGCCCC
GACGACGTAG CGGACATCAC GACCAAATAC GAGGCGATCC GAGCCGAGGC ACTTCCTCAG
CGAGCGTCGC TTGAGCTTAT TGGGGAGATG AAGAAACGAT GGATCGGGAA CTGA
 
Protein sequence
MPNPKDLDPT TSPIAFFGYE LRRYRQQAGL SQGKLARRTG FALGTISMAE TGRRPPTEDF 
VRRCDEALGV EGALIRIKEM MDNVAARLPA WFRPWVEVEQ AADSLRTWEP LLVPGLLQTA
DYARVLFNGE PRASAERTEL DVTARLERQH VLERENAPML WVVIDEGVLI RRIGDDTTMA
AQMDHLLDAG HMPHVTIQVL PFGSGSTVGL LGGFVIAQVR GLANTVYMES AGQGQVTDRP
DDVADITTKY EAIRAEALPQ RASLELIGEM KKRWIGN