Gene Sros_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2479 
Symbol 
ID8665765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2705185 
End bp2706690 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content73% 
IMG OID 
Productstreptogrisin C 
Protein accessionYP_003338198 
Protein GI271964002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0239994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0372283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGCA GAAGTGCCGT TACAGCGGGC TTCGCACTCG CCCTCACGCT GGTGGCGACC 
CCCGCCACCG CCCACGCGGC CCCCGGCGGC GACCCCGCCC CCTCCGCGTT CGCCACGGCC
CGGGCACAGG CCGCGGCCGC CGCCAAGCCC GCCCCCGCCA TGATCGACGC CCTCAAGCGC
GACCTCGGGA TCACAGGTGA GCAGGCCACC GCCCGCCTGA TCAACGAGGC CGCCGCGGCC
AAGGTCGAGC CCGCCGTCCG CGGGCAGCTC GGCAAGGACT TCGCCGGCGC CTGGGTGACC
GGCCCCACCT CCGAGTTCGT GGTCGCCACC ACCGACTCCA CGAAGATCAC CTCCATCCTC
CGCGCCGGCG CGGAGGCGAA GCTCGTCAAG CACTCGCTGG CCACGCTCGA AGCCGCCAGG
GAACGGCTCG ACGCCGTCAC CGCCGCGCCG TACGGGGTGG TGCCCTCCTG GTACGTCGAC
CTGCAGAGCA ACAGCGTCGT CGTGCTGGCG GGAGACCCCG CCGCCGCGGA GGCGTTCGTG
AACGCCGCCG GGCTCGACAG GGCGCTGGTG CGCGTGGAGG CCTCCACCGA GCGGCCCCGG
CCGCTCTACG ACGTCCGCGG CGGCGACGCC TACTACATCG GCAGCGGCTC CCGCTGCTCG
GTCGGCTTCT CGGTCACCCG CGGCACCCAG GGCGGCTTCG CCACCGCGGG CCACTGCGGC
ACCACCGGAG CCAGCACCAG GGGCTCCAAC CAGGTCGCGC AGGGCACCTT CCAGGGCTCG
TCCTTCCCCG GCAACGACTA CGCCTGGGTC GCGGTCAACT CCAACTGGAC GCCGGTCGGC
GTCGTGAACG GCTACAGCAA CGGCATCGTC CAGGTCGGCG GGTCGGCCGA CGCGGCCGTG
GGCTCGTCGG TCTGCCGGGC CGGCTCGACC ACCGGCTGGC ACTGCGGCAC CATCCAGGCC
CGCAACGCCA GCGTCACCTA CCCCGAGGGC ACCATCACCG GCCTGGGCCG TACCAGCGTG
TGCGCCGAGC CAGGCGACTC CGGCGGTTCC TACATCTCCG GCAGCCAGGC CCAGGGCGTC
ACCTCCGGCG GGTCGGGCAA CTGCTCCTCC GGCGGCACGA CCTACTTCCA GCCGATCAAC
GAGATCCTGC AGGTCTACGG GCTCACCCTG GTCACCGGGG GCAGCAACCC GCCGACCGGC
TGCACCGGCT ACCAGAACAC CTACAACGGC TCGCTGACCT CCAACCAGAA CGGCTACCAG
CCGAGCAGCA CCGGCTACAC CGCCGGGGCG GGCGTGCAGC GCATCTGCCT GGACGGCCCG
AACGGCACCG ACTACGACGC CTACCTGCAG AAGCTGAACG GTTCCACCTG GACCAACGTG
GCCAGCGGGA CCACCCCCAA CCCCGACGAG GCCTTCACCT ACAACGGCAC CGCGGGCACC
TACCGCGTCC GGGTCCACGC CTACAGCGGC TCGGGCTCCT ACACCCTGGG TCTGACCAGG
CCCTGA
 
Protein sequence
MLRRSAVTAG FALALTLVAT PATAHAAPGG DPAPSAFATA RAQAAAAAKP APAMIDALKR 
DLGITGEQAT ARLINEAAAA KVEPAVRGQL GKDFAGAWVT GPTSEFVVAT TDSTKITSIL
RAGAEAKLVK HSLATLEAAR ERLDAVTAAP YGVVPSWYVD LQSNSVVVLA GDPAAAEAFV
NAAGLDRALV RVEASTERPR PLYDVRGGDA YYIGSGSRCS VGFSVTRGTQ GGFATAGHCG
TTGASTRGSN QVAQGTFQGS SFPGNDYAWV AVNSNWTPVG VVNGYSNGIV QVGGSADAAV
GSSVCRAGST TGWHCGTIQA RNASVTYPEG TITGLGRTSV CAEPGDSGGS YISGSQAQGV
TSGGSGNCSS GGTTYFQPIN EILQVYGLTL VTGGSNPPTG CTGYQNTYNG SLTSNQNGYQ
PSSTGYTAGA GVQRICLDGP NGTDYDAYLQ KLNGSTWTNV ASGTTPNPDE AFTYNGTAGT
YRVRVHAYSG SGSYTLGLTR P