Gene Sros_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2168 
Symbol 
ID8665450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2326443 
End bp2327369 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content71% 
IMG OID 
Productdihydrodipicolinate synthase 
Protein accessionYP_003337894 
Protein GI271963698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.306084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGC CAACTGGAAC CTCCGACGCA CCCTTCGGTC GCATGCTGAC CGCCATGGTC 
ACGCCGTTCA CCGATGGCGG CGCGGTCGAC TACGAGGGGG CGCAGCGCCT TGCCACCTAC
CTGGTGGACG AGCAGCGCAA CGACGGCCTC GTCGTGAGCG GCACGACGGG TGAGTCCCCG
ACCACCTCCG ACGACGAGAA GGAGCGCCTC CTGCGCGCCG TCGTCGAGGC GGTCGGCGAC
CGCGCCGCCG TCGTGGCCGG AGCGGGCAGC AACGACACCC ACCACAGCGT CGGGCTGGCC
CGCGCCGCCG AGCGCGCGGG GGCCCACGGC CTCCTGCTGG TGACGCCGTA CTACAGCAAG
CCACCGCAGG AGGGGCTCTA CCGCCACTTC ACCGCCGTCG CCGACGCCAC CGGCCTGCCG
GTCATGCTCT ACGACATTCC CGGCCGCAGC GGCGTGCCGA TCCAGACCGC CACCCTCGTA
CGGCTCGCCC GCCACGAGCG GATCGTCGCG GTGAAGGACG CCAAGGCCGA CCTGTTCGCC
GGGTCGCAGA TCATGGCGGG CACCGACCTG GCGTTCTACT CCGGTGACGA CATGCTCAAC
CTGCCGTGGC TCTCGGTCGG GGCCGCCGGG TGCGTCAGCG TCGTCGGGCA CGTCGTCGGC
GCGGAGATCG CCGCGATGAT CGGGCTGTAC CGCTCGGGTG ACGTCTCGGG CGCGCTCGCC
GTCCACCGCA GGCTGCTCCC GGTGATCTCC GGGATCATGA CGCAGGCCGG CGGCGCGATC
ATGGCGAAGG CGGCGCTGAC CCTGGTGGGG CGATCCGCGG GACCGGCGCG ACTGCCACTG
GTGGAGGCCA CCGAAGAGCA GGTCGCACGG CTGAGAGAAG ACTTGATCGC GGGCGGCGTG
AAGCTGTCCG ACGGAGTTGT TTCATGA
 
Protein sequence
MAAPTGTSDA PFGRMLTAMV TPFTDGGAVD YEGAQRLATY LVDEQRNDGL VVSGTTGESP 
TTSDDEKERL LRAVVEAVGD RAAVVAGAGS NDTHHSVGLA RAAERAGAHG LLLVTPYYSK
PPQEGLYRHF TAVADATGLP VMLYDIPGRS GVPIQTATLV RLARHERIVA VKDAKADLFA
GSQIMAGTDL AFYSGDDMLN LPWLSVGAAG CVSVVGHVVG AEIAAMIGLY RSGDVSGALA
VHRRLLPVIS GIMTQAGGAI MAKAALTLVG RSAGPARLPL VEATEEQVAR LREDLIAGGV
KLSDGVVS