| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2086 |
|---|
| Symbol | |
|---|
| ID | 8665368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2240461 |
|---|
| End bp | 2241423 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter ATP- binding protein |
|---|
| Protein accession | YP_003337814 |
|---|
| Protein GI | 271963618 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.441479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGT TGGAAGCCCG GGACCTGCAC GTGGAGTTCT CCTCGCGCGG GCGGCGCGCC
CGCGCGGTCG ACGGGGTGAA CCTCCAGGTG GGCGAGGGGG AGATCGTCGC GCTGGTCGGC
GAGTCCGGCT GCGGCAAGAC GACGCTGGCC CGCACCCTGC TCGGCCTGGA GCGGCCCACC
TCGGGATCGG TCCTGTACGG CGGAGCCCCC CTGTCCTACT CCTCGCGCGC GCTGAAGGCC
TACCGCCGCG AGGTGCAGCT CGTGCTGCAG GACCCGACCG GGTCGCTCAA CCCCCGGCAC
ACCGTCTACG AGGCGGTGGC CGAGGGGCCG CGCATCCACG GCATGCCCGA CGAGGAGGAG
CGGGTCGCCT CGGCGCTGTC ACGGGCCGGG CTCCGCCCGC CGGAGCGATT TCTGCACTCC
TACCCTCACG AGCTGTCCGG CGGGCAGCGG CAGCGCGTCG TCATCGCCGG AGCCCTCGCG
CTGGACCCCC GGGTCCTGGT CGCCGACGAG CCGGTGGCCT CGCTGGACGC CTCGGTCCGC
GGTGAGATCC TCGCCCTGAT GCTGCGGCTC CGCGACGAGC TGGGGCTGTC CGCCCTGGTC
GTCACCCACG ATCTCGGGCT GGCCTGGAAC ATCGCCGACC GCGTCGCGGT GATGTATCTC
GGCAGGATCG TCGAGTCGGG GCCCGTGGAG CAGATCCTGA AGTCGCCGTC CCACCCCTAC
ACCCAGGCGC TGCTGTCGGT CCTGCCGGAG TCGCCGTCGC CCGTGGTGCT GGGCGGTGAG
CCGCCGGACC CCACCCGGAT CCCGCACGGC TGCCGCTTCC ACCCCCGCTG CCAGGTCCTC
GCCGCGGGCA CGGCGGCCGG GGCCGGGGTC GACGGCCGGT GCAGGTCACA GCTCCTGCCC
GTGCTCTCCT CCTCGGCGGA CTCCCAGGTC GCCTGCCACT ACGCCGGAGC GCGCCGGCGG
TAG
|
|---|
| Protein sequence | MSLLEARDLH VEFSSRGRRA RAVDGVNLQV GEGEIVALVG ESGCGKTTLA RTLLGLERPT
SGSVLYGGAP LSYSSRALKA YRREVQLVLQ DPTGSLNPRH TVYEAVAEGP RIHGMPDEEE
RVASALSRAG LRPPERFLHS YPHELSGGQR QRVVIAGALA LDPRVLVADE PVASLDASVR
GEILALMLRL RDELGLSALV VTHDLGLAWN IADRVAVMYL GRIVESGPVE QILKSPSHPY
TQALLSVLPE SPSPVVLGGE PPDPTRIPHG CRFHPRCQVL AAGTAAGAGV DGRCRSQLLP
VLSSSADSQV ACHYAGARRR
|
|---|
| |