Gene Sros_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2057 
Symbol 
ID8665339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2210738 
End bp2211409 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003337785 
Protein GI271963589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.334012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.891873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG GCAAGTACCG CGGCAAGAGG CAGGCCGAGG CCGAACGCAA CGACCACGCG 
CTGCTCCGGG CCGCCCGGGA GGTGCTCGCC GCCGACGGCG CCCACACCTC GGTGGCGGCG
ATCGCCGCCC GGGCCGGGGT CGGGATCGGC AGCCTCTACC GCCGCTACCG CACCAAGGAG
GAGCTCTTCC AGCGCCTGTC GGAGCTGTCC CTCGACCAGT GGAACGAGGC CGCGGAGGCG
GGGCTCGCCC ACGAGGACCC ATGGGCCGGG CTGGCCGGCT TCGTCACCGC CTGCGTCGAG
TTCGGCCAGG GATCCCTGGC CCCGGTCGCG GGGACCATCG ACGTCACCCC GGAGATGTGG
GCCAAGAGCG CGCGCGGCGA CGAGATCCTG GCCGCGATCA TCGCCCGAGC CTGCGAAGCG
GGGGTCCTGC GGCCGGAGAT CACCCCTACG GACGTCTCCC TCCTGATCGA GCAGCTCGGC
TCCTCACCGA TGCTCGACCA GATCCGCAAG CAGGGCCGCG AGGATCTCGT CGAGGCCGCC
GTGGCCGCCC GGCGGCGCCT CATCGCCATC ACCCTGGACG GCCTGCGCGC CGTCCACCGC
GGACCGCTGC CCGGCCCGCC GCCCGGCGAG CACCTCTTCA CCGAACGCTG GAGGCGCGAC
TCCCCCGCCT GA
 
Protein sequence
MSDGKYRGKR QAEAERNDHA LLRAAREVLA ADGAHTSVAA IAARAGVGIG SLYRRYRTKE 
ELFQRLSELS LDQWNEAAEA GLAHEDPWAG LAGFVTACVE FGQGSLAPVA GTIDVTPEMW
AKSARGDEIL AAIIARACEA GVLRPEITPT DVSLLIEQLG SSPMLDQIRK QGREDLVEAA
VAARRRLIAI TLDGLRAVHR GPLPGPPPGE HLFTERWRRD SPA