Gene Sros_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1957 
Symbol 
ID8665239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2100984 
End bp2102441 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content77% 
IMG OID 
Productputative transcriptional regulator, PucR family 
Protein accessionYP_003337688 
Protein GI271963492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.665292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCCGA CACTCCGCAC CGTCGTGCGA CGCCTGCCAC TCAAGCTCGG CGTGCTCACG 
GGACAGGACG AGCTCGACCG GCCGGTGCGC TGGGTGGCGG TCAGCGAGCT GGAGGACCCG
ACCCCCTTCC TGGAGGGCGG CGAGCTGGTC CTCACCACGG GCATGCGCCT GGACGCCGGC
AACGCCGGGC CGTACGTCGA CCGGCTGGTC GGCAAGGGGG TCACCGGGCT CGGGTTCGGC
GTCGGGCTGG GGCACGAGGT GATCCCGGCC GGGCTGGTGG AGGCGGCGAC GCGGGCGGGG
CTGCCGCTGA TCGAGGTGCC GCGCGACACC CCGTTCGTCG CGATCGGCAA GCTGGTCAGC
GACCTGATCG CCGCCGAGCA GTACGACGAG ATCAGGCGCG CCTTCGCCAC GCAGGGCCGC
CTCACCCGGG CCGCCCTCCG CCCCGAGGGC CCCCGCGCGG TGGTCGACGG TCTGGCCCGG
GAACTCGGCG GCTGGGCCGC CCTGCTCGAC GAGGCGGGAG CCGTACGGCA CGCCGCCGGA
GAGGGCGCGG CCCGCACCGC CGACCTCCTC CCCGAACTGG AGCGCCTGCG CAGGCCCGCG
GGCGGGGGCG CGCCCGCGAG CCTGGCACTC TCCACGCCGC AGGAGCACGT CATCGTGCAA
CCGCTGGGCG CCCGTCGCGT CCGGGGGTTC TTCGCGGTCG GCCTCGACCG GCCGTTCACG
CCTGTCGCGC ACACCGTGGT CAACGCCGCG GGTTCCCTGC TGACGCTCGC CGTCGAGCAC
GGCAGGGAGC ACCTGGCCGC CGAGCGCCGG GTCCGTTCGG CGGTGCTCCG GCTGCTGCTG
GCCGGGCAGG TGCGGGCCGC GCGGGAGACG CTGGAACTGC TGGGGGACGG GCTCCCGGGC
GGGCCCCTGG TGGTCCTGGC CGCCGGCGGC GACCAGGAGG CGGTGCTGGA GGCCGCGGGC
GACGAGTTCG CGGTGGCGGC CGAAGATCGG GTGGTGGTCG TCGTCGCGGC GGATCGGGTC
GAGGACACGG TCTCGACGCT GCGGGAGCAC GGCCCGGTCG GCATCGGCTC CCCGGTCGGC
CTCGACGGAC TGCGCGCCGG GCTCGACCAG GCCGACCGCG CGCTCGCCTC GGCCCGCCGC
GCCGCCGAGC CCGTCATGCG CTTCGCCGAC CTCGCGGGCC AGGGCCTGCT GTCCCTGCTG
GACCCCGGGA TGACCGCGGC GTTCTCCTCG GCGCTGCTCG CCCCCCTGCA TGAGTACGGC
TCGCGCGCCG ACCTGCTGGA GTCCCTCCGC GCCTACCTGG CCTGCAACGG CCACTGGGAC
GCGGCGGCGC AGCGGCTCGG CGTGCACCGC CACACCCTGC GCTACCGCAT GCGCCGGGTC
GCCGATCTCC TCGGCCGCGA CCTCGACGAC CCGGCCGCCC GCGCCGAGCT CTGGGTCGCG
CTGGCCGTCA CCGAGTGA
 
Protein sequence
MAPTLRTVVR RLPLKLGVLT GQDELDRPVR WVAVSELEDP TPFLEGGELV LTTGMRLDAG 
NAGPYVDRLV GKGVTGLGFG VGLGHEVIPA GLVEAATRAG LPLIEVPRDT PFVAIGKLVS
DLIAAEQYDE IRRAFATQGR LTRAALRPEG PRAVVDGLAR ELGGWAALLD EAGAVRHAAG
EGAARTADLL PELERLRRPA GGGAPASLAL STPQEHVIVQ PLGARRVRGF FAVGLDRPFT
PVAHTVVNAA GSLLTLAVEH GREHLAAERR VRSAVLRLLL AGQVRAARET LELLGDGLPG
GPLVVLAAGG DQEAVLEAAG DEFAVAAEDR VVVVVAADRV EDTVSTLREH GPVGIGSPVG
LDGLRAGLDQ ADRALASARR AAEPVMRFAD LAGQGLLSLL DPGMTAAFSS ALLAPLHEYG
SRADLLESLR AYLACNGHWD AAAQRLGVHR HTLRYRMRRV ADLLGRDLDD PAARAELWVA
LAVTE