Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1801 |
Symbol | |
ID | 8665079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1923649 |
End bp | 1924776 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein |
Protein accession | YP_003337534 |
Protein GI | 271963338 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.563755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCGTG CCCGGTACAC CCGTCGTCTT CCGGCCGCCG CCCTGGTCGC CGGTCTCGCT CTCGCCGTTT CGGCCTGTGG CGGAGGGTCC ACGGACACCG CCGCCGCGCC CGCCGCGAGC GCCTCGTCCG CCCAGCTCGA CCCGAACATG GATCTGTCCA AGCAGAGCCT CACCATTTCG GTCTGGCCGG GTTACACCCC CGAAGACCTT CCCAAGCGGG TCAAGGACAA ACTCAAGACC GAGCTCAAGG TCACCCTGCA CGACACCAAC GAGATCATCA TGGGCAAGCT GACCACCGGG GCCGACACCG GTCTCGACGT CGCCTTCGTC TCCGGCCAGT ACGCCCAGGC CCTCAACGAG GCCGGGCTGC TGGAGCCGAT CCACCCCGAG CTCATCCCCA ACCTGGCCAA CCTCTACCCC GAGGCCAAGG AGCTCTCCTA CGACAAGGGT AACGTCTTCT CCGTCCCCTA CACCTGGGGC ACCACCGGCA TCTGCTACCG CAGCGACCTG GTGAAGACGC CGCCGACGAG CTGGAACGAC ATCCTCAACC CGCCGGCCGA GGCGAAGAAG AAGGTCACCA TGATGACCAC CGAGCGCTGG CTGGCCCTGC CCGCCGTCAA GGCGCTCGGC CTGTCGGTCA ACACCAAGAG CGACGACGAT CTGGCCAAGA TCAAGGCGAA GCTGATCGAG GCCAAGCCCA ACCTGCTCCG CTACGACGAC GTCGACTTCG GCAAGCGCCT CATCAGCGGC GAGGCCGTGA TGGTCGAGGC GTGGGACGGC TGGTGCCCGA CCAGCGAGAA GAACATCGAG TTCGTGGTGC CGAAGGAGGG CAGCGACCTC TGGGTGGACA CGATGGTCGT GCTGAAGTCC TCCAAGAACA AGGAAGCCGC GCACGCGTTC GTCAACTTCA TCCTGGACCC GGAGATCCAC GGCTGGGCCG CGCAGAACAT CCTCTACAAG GTCCCGAACA AGGCCGCCAT GGACGCCCTC CCCGCGGACC TCAAGGAGAA GAACAAGCCG CTCAACATGA GCCCGTCGCA GCTCCTCGCG GGCGAGTCCA TCATCGACCT CGGCGAGGAC TCCACCAAGT TCACCCGCCT GGCCACCGAG GTTCAGGCCG CGAAGTGA
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Protein sequence | MSRARYTRRL PAAALVAGLA LAVSACGGGS TDTAAAPAAS ASSAQLDPNM DLSKQSLTIS VWPGYTPEDL PKRVKDKLKT ELKVTLHDTN EIIMGKLTTG ADTGLDVAFV SGQYAQALNE AGLLEPIHPE LIPNLANLYP EAKELSYDKG NVFSVPYTWG TTGICYRSDL VKTPPTSWND ILNPPAEAKK KVTMMTTERW LALPAVKALG LSVNTKSDDD LAKIKAKLIE AKPNLLRYDD VDFGKRLISG EAVMVEAWDG WCPTSEKNIE FVVPKEGSDL WVDTMVVLKS SKNKEAAHAF VNFILDPEIH GWAAQNILYK VPNKAAMDAL PADLKEKNKP LNMSPSQLLA GESIIDLGED STKFTRLATE VQAAK
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