Gene Sros_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1611 
Symbol 
ID8664888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1718777 
End bp1719301 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content74% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003337346 
Protein GI271963150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA ACCTGAACAT CCGGCTCGCC GGCGGCGACG ACGCGGCGCT GGCCGACTGT 
TTCCACGCCC ATGGATCTCT GGTCCGCTCC TACCTGCGGC GGTTCGTCCC CCCGCAGGAG
ATCGAGGACC TGCAGCAGGT CGTGTTCGCC GAGGTGTGGC GTTCCCGGCA CCGCTTCGAC
CCGGCGCGCA GCCTCCCGGC GTGGCTGATC GGCATCGCGC ACAACCGGGC GGTGGACCAC
CTGCGGGCGC GCACGCCGCA GACGGTGCCG CTGGACGTGG TGGCCGATCC GGCCGGCGCG
GACGGCCGGA CCCACGGAGA CGGCCTGGCC GAGCGCGACC AGGTCCAGCG GGCGCTGGCG
GAGCTCCCCG CCCCCCAGCG CCAGGCCATC GAGCTGGCCT ACTACGGCGA GCTGACCCAG
CGGGAGATCG CCGAGAAGCT GAGCGTGCCG CTGGGCACCG TCAAGGCCCG TACGGCCCGC
GGCCTGCGCC GCCTGTCGGA CATCCTCACC CCGGTCGCGG CATGA
 
Protein sequence
MEDNLNIRLA GGDDAALADC FHAHGSLVRS YLRRFVPPQE IEDLQQVVFA EVWRSRHRFD 
PARSLPAWLI GIAHNRAVDH LRARTPQTVP LDVVADPAGA DGRTHGDGLA ERDQVQRALA
ELPAPQRQAI ELAYYGELTQ REIAEKLSVP LGTVKARTAR GLRRLSDILT PVAA