Gene Sros_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1399 
Symbol 
ID8664674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1458506 
End bp1460032 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter ATP-binding protein 
Protein accessionYP_003337137 
Protein GI271962941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.172278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGGAA GGAAGGGACG TCTCTTGAAC GACGAGATCC TCCGGGTCGA AGGCCTGCGC 
AAGGAGTTCC CGGGTGTGGT CGCGCTGGAC GGGGTCGACT TCACCCTCAG GGCCGGCGAG
GTCCACGTCC TGCTCGGGGA GAACGGCGCG GGCAAGAGCA CGCTGATCAA GATGCTCTCC
GGCGCCTACC ACCCCGACGG AGGGCGGATC CTGGTCGACG GGGCGCCTAC CGAGATCCGC
ACCGCGAGCG ACGCGCAGAG ACTGGGCATC GCCACCATCT ACCAGGAGTT CAACCTGGTT
CCCCAGCTCA CCGTCGGTGA GAACCTCGCC CTGGGACGTC CGCCCCGCCG TTTCGGCTTC
GTCGACACCG GGCGGATGCA CGAGCAGGCG GGGGAGCTGC TGCGGAGGGT CGGCGTCGAC
GTCGACCCGC GCACCCCGGT GGCGCGGCTG GGCATCGCGC GCATGCAGAT GGTCGAGATC
GCCAAGGCGC TGGGCCTGAA CGCCCGCGTG CTCATCATGG ACGAGCCGAC CGCCGTGCTC
ACGACGACCG AGGTCGAGCG GCTGTTCGGC ATCGTCCGGC AGTTGCGCGA CCAGGGTGTG
GCGATCGTGT TCATCACCCA CCACCTTGAG GAGATCCCGC AGATCGGCGA CCGCGTCACC
GTGCTGCGGG ACGGCAGCTC GGTGGCCGAG GTGCCGGCGA CCACTCCGGA GAACGAGCTG
GTCAGGCTCA TGGTCGGCCG TCCCATCGAC CAGCAGTACC CCCGGGAGCC GGCGGCGCCG
GGCGGTCCTC TCCTGCAGGT GCGGGGGCTC CGCAGGGAGG GCGAGTTCAC CGACGTCTCC
TTCGAGGTGC GCGCCGGAGA GGTCGTGGGC CTGGCGGGAC TGGTCGGCGC GGGCCGTACC
GAGGTCGCGC GGTCGATCTT CGGCGCGGAC GCCTACGACT CCGGCGAGGT CCTGGTGAAC
GGCCGCCCGC TGGCCCGCGG CGACGTGCAC GCCGCCATGG AGGCGGGCCT CGGCCTGGTC
CCCGAGGACC GCAAGGGCCA GGGGCTGGTG CTCGGCGCCG ACGTGGGCGA GAACCTCGGC
CTGGTCACGC TGCGGCGGGC CAGTCGCGGC GGGTTCGTCG ACAGGCAGGG ACAGCGCAGG
GCCGCCGCCG AGGTGGCCCG GCAGCTCGGC GTGCGGATGA GCGGCCTCGG CCAGGAGGTC
CGCACGCTGT CGGGTGGCAA CCAGCAGAAG ATCGTCATCG GGAAGTGGCT GCTCGCCAAG
GCGAGCGTGC TCATCCTCGA CGAGCCCACG CGGGGTGTGG ACGTGGGGGC CAAGGTCGAG
ATCTATCAAC TGATCAATTC GCTCACCGCC TCCGGGCACG CGGTGCTCAT GATCTCCAGC
GATCTCCCCG AGATCCTGGG CATGAGCGAC CGCGTCCTGG TGATGGCCCG CGGCAGGCTC
GTCGGGGAGC TCGCCGCCGG TGAGGCTACA CAGGACTCGG TGATGGCCCT GGCCGTGACC
GAGGTGGAGG ATGCTCGTGT CCACTAA
 
Protein sequence
MRGRKGRLLN DEILRVEGLR KEFPGVVALD GVDFTLRAGE VHVLLGENGA GKSTLIKMLS 
GAYHPDGGRI LVDGAPTEIR TASDAQRLGI ATIYQEFNLV PQLTVGENLA LGRPPRRFGF
VDTGRMHEQA GELLRRVGVD VDPRTPVARL GIARMQMVEI AKALGLNARV LIMDEPTAVL
TTTEVERLFG IVRQLRDQGV AIVFITHHLE EIPQIGDRVT VLRDGSSVAE VPATTPENEL
VRLMVGRPID QQYPREPAAP GGPLLQVRGL RREGEFTDVS FEVRAGEVVG LAGLVGAGRT
EVARSIFGAD AYDSGEVLVN GRPLARGDVH AAMEAGLGLV PEDRKGQGLV LGADVGENLG
LVTLRRASRG GFVDRQGQRR AAAEVARQLG VRMSGLGQEV RTLSGGNQQK IVIGKWLLAK
ASVLILDEPT RGVDVGAKVE IYQLINSLTA SGHAVLMISS DLPEILGMSD RVLVMARGRL
VGELAAGEAT QDSVMALAVT EVEDARVH