Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1320 |
Symbol | |
ID | 8664595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1365220 |
End bp | 1366812 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | carboxyl transferase |
Protein accession | YP_003337060 |
Protein GI | 271962864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00164381 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.627316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTG AGCCGGTAGC CGCCGGGATT GACATTCACA CCACGGCGGG CAAACTCGCC GATCTGGAGC GCCGCCTGGA CGAGGCGGCC CACGCCGGTT CCGCGCGCGC GGTGGAGAAG CAGCACGCCA GGGGCAAGAT GACCGCCCGG GAGCGGGTCC TGGAGCTGCT GGACGACGGC AGCTTCGTGG AGTTCGACGA GCTGGCCAGG CACCGGTCCA CGAGCTTCGG CCTGGAGCGC GAGCGCCCCT ACGGCGACGG CGTGGTGACC GGCTACGGCA CGGTGGACGA CCGGCCTGTG GCGGTGTTCG CCCAGGATTT CACGGTGTTC GGCGGATCGC TGGGCGAGGT CTTCGGCGAG AAGATCGTCA AGGTCATGGA CCACGCGCTG AAGACCGGCT GCCCGGTGAT CGGCATCAAC GACTCCGGCG GGGCGCGCAT CCAGGAGGGC GTCGTCTCCC TGGGCCTGTA CGCCGAGATC TTCAAGCGGA ACGTGCACGC CTCCGGGGTG ATCCCGCAGA TCTCACTGGT CATGGGTCCG TGCGCGGGCG GCGCGGTCTA CTCCCCCGCG CTCACCGACT TCGTGCTGAT GGTGTCGGAG AAGTCGCACA TGTTCATCAC CGGCCCCGAC GTCATCAAGA CGGTCACCGG CGAGGAGGTG ACGTTCGAGG AGCTCGGCGG CGCGCACACC CACAACTCCA GGTCGGGCGT CGCGCACTAC GAGGCCGCCG ACGAGGCCGA CTGCCTGGAG TTCGCCAGGG CGCTGCTGTC CTATCTGCCG TCCAACAACC TGGACGAGGC TCCGGCCCTC GACGTCGCCC CGGTCCTGGA GACCACCGGC GAGGACCGCG AGCTCGACAC GCTGATCCCG GATTCGGCGA ACCAGCCGTA CGACATGCAC ACGGTCATCG AGCATGTCGT CGACGACGGT GAATTCCTTG AGGTGCACGC GCAATTCGCG CCCAACATCG TCGTTGGCTT CGGCAGGGTC GAAGGACGCT CGGTGGGGAT CGTGGCCAAC CAGCCGATGA GTTTCGCGGG CACCCTGGAC ATCGCGGCCT CGGAGAAAGC GGCGAGATTC GTCCGAACAT GCGATGCGTT TAACATTCCG GTCCTGACAT TTGTGGATGT GCCCGGATTC CTACCGGGCA CCGACCAGGA ATGGAACGGG ATCATCCGCC GCGGCGCCAA GCTGCTCTAC GCCTACGCGG AGGCGACCGT GCCACTGGTC ACGGTGATCA CCCGCAAGGC GTACGGCGGC GCCTACGACG TCATGGGCTC CAAGCATCTG GGCGCGGACG TCAACCTGGC CTGGCCGACC GCGCAGATCG CGGTGATGGG TGCGCAGGGC GCGGTCAACG TCCTCTACCG GCGCGAGCTC ACCTCGGCCG ACGACCCCGA CACCGAGCGG GCCCGGCTCG TCACCGAATA CGAGGACGCT CTCGCCAACC CGTATCTCGC CGCCGAACGC GGGTATGTGG ATGCGGTGAT CCGTCCCTCC GAGACCCGCG TGCGGATCGT CAGGGCGCTG CGTGCCCTGC GCAACAAGCG CGCGACCCTG CCCCCGAAGA AGCATGGGAA CATCCCGCTA TGA
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Protein sequence | MSAEPVAAGI DIHTTAGKLA DLERRLDEAA HAGSARAVEK QHARGKMTAR ERVLELLDDG SFVEFDELAR HRSTSFGLER ERPYGDGVVT GYGTVDDRPV AVFAQDFTVF GGSLGEVFGE KIVKVMDHAL KTGCPVIGIN DSGGARIQEG VVSLGLYAEI FKRNVHASGV IPQISLVMGP CAGGAVYSPA LTDFVLMVSE KSHMFITGPD VIKTVTGEEV TFEELGGAHT HNSRSGVAHY EAADEADCLE FARALLSYLP SNNLDEAPAL DVAPVLETTG EDRELDTLIP DSANQPYDMH TVIEHVVDDG EFLEVHAQFA PNIVVGFGRV EGRSVGIVAN QPMSFAGTLD IAASEKAARF VRTCDAFNIP VLTFVDVPGF LPGTDQEWNG IIRRGAKLLY AYAEATVPLV TVITRKAYGG AYDVMGSKHL GADVNLAWPT AQIAVMGAQG AVNVLYRREL TSADDPDTER ARLVTEYEDA LANPYLAAER GYVDAVIRPS ETRVRIVRAL RALRNKRATL PPKKHGNIPL
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