Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1272 |
Symbol | |
ID | 8664547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1309564 |
End bp | 1310835 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | nucleoside ABC transporter membrane protein |
Protein accession | YP_003337013 |
Protein GI | 271962817 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGCTG TGACCCTGGC GGAGGCTCCG CTGGAGGAGC CTACGAAGCC CGTCAAGTTC AAGCTCACCT GGCAGGTCCT CCTGCTCGCC CTGGGCGGGC TCGTCGTCCT GCTGTCCTTC GCCCGGGCCG TCACCGGCGC CGTCGACCTC ACCTCGGCGG GTGCGATCAA CGCGGCCGTC GCGCTGGCCG TACCGATCGG CCTGGCCGGG CTCGGCGGAC TGTGGGCCGA ACGGGCCGGC GTGGTCAACA TCGGCCTTGA AGGCATGATG ATCCTGGGCA CCTGGTTCGG CGCCTGGGGG GCGATCCACT TCGCCAACCC CTGGGCGGGC GTCATCGCAG GTGCGATCGG TGGGGCCCTC GGTGGCCTGC TGCACGCGAT CGCCACGGTG ACGTTCGGGG TGGACCACAT CATCTCCGGC GTCGCGATCA ACATCCTGGG CCTGGGCGTC ACCCAGTTCC TGTCCAAGGT CACCTTCGCC GAGATGCCGG GCGGCGGCGA CTCCCAGTCA CCTCCCGTGC CCAAGCCGGG CACCGTGAGC CTGCCGGGGA TCGGAGATCC GCTGGCCACG CTGGAGGCCA AGCAGTGGTT CCTGCTGTCC GACGTGGCGG GCATCCTGCG GGGCCTGACG ACGAACGTCT CGCTCTTCAC CATTCTGGCG ATCCTGCTGA TCCCGCTGAC GTTCTACGTG CTCTGGCGCA CGGCGTTCGG CCTGCGGCTG CGCTCCTGCG GCGAGCGCCC GGTGGCGGCG GAGTCGCTGG GCGTCAACGT GTACTACTAC AAGTACGTCG CGGTGATCGT CTCCGGCGCC TTCGCCGGCC TCGGCGGCGC GTTCCTGTCC CTGGTGGCCG CCAGCGCCTA CCGCGAGGGG CAGACCGGTG GTCGCGGCTT CATCGGCCTC GCCGCCATGA TCTTCGGTAA CTGGCGGCCG GGCGGACTGG CGGCCGGTGC GACGCTGTTC GGCTACACCG ACGCGCTCCA GCTCCGCCGG GGCGGTGAGT CGGTGCACGC GCTGCTGCTG GTGGTGGCTG TTCTGATCGC CGGCGTGGCG GTCTACCAGC TCGTCAGGCA GAACCGCGCC AGGGCGGCCC TGATCACCGG TGTCGCGGCG ATCGCGGTGT TCGTCATGTT CGCCATGACC GACACCATCC CACCCCAGTT CACCTCCGTC ACCCCGCACA TCACCACGCT GCTGGTGCTG TCCTTGGCGG CTCAGCGGCT CCGCCCGCCC GCCGCCAACG GTGTGTCGTA CCGCAGGGGG CAGGCGAAGT GA
|
Protein sequence | MSAVTLAEAP LEEPTKPVKF KLTWQVLLLA LGGLVVLLSF ARAVTGAVDL TSAGAINAAV ALAVPIGLAG LGGLWAERAG VVNIGLEGMM ILGTWFGAWG AIHFANPWAG VIAGAIGGAL GGLLHAIATV TFGVDHIISG VAINILGLGV TQFLSKVTFA EMPGGGDSQS PPVPKPGTVS LPGIGDPLAT LEAKQWFLLS DVAGILRGLT TNVSLFTILA ILLIPLTFYV LWRTAFGLRL RSCGERPVAA ESLGVNVYYY KYVAVIVSGA FAGLGGAFLS LVAASAYREG QTGGRGFIGL AAMIFGNWRP GGLAAGATLF GYTDALQLRR GGESVHALLL VVAVLIAGVA VYQLVRQNRA RAALITGVAA IAVFVMFAMT DTIPPQFTSV TPHITTLLVL SLAAQRLRPP AANGVSYRRG QAK
|
| |