| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1199 |
|---|
| Symbol | |
|---|
| ID | 8664474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1223754 |
|---|
| End bp | 1224737 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | polysaccharide biosynthesis protein CapD |
|---|
| Protein accession | YP_003336940 |
|---|
| Protein GI | 271962744 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.530201 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGAGC TTGAAGGGGC GTCGATCCTT GTAACCGGGG GGACGGGGTC GTTCGGAAAG
GCTTTTATCC GGCATGTGCT CGACCATCAC GACCCGCGCC GGGTCGTCGT CTTCTCTCGG
GACGAGCTCA AGCAGTATGA GGTCAGGCAG CTGTTCGCCG ACGACTCCAG GCTGCGCTGG
TTCATCGGCG ACGTGCGCGA TCGTAGCCGC CTGACCCGTG CCATGCACGG TGTCGACCAC
GTGGTGCACG CGGCCGCGCT CAAGCAGGTC GACACGGCCG AGTACAATCC GTTCGAATAT
GTTCTGACGA ATGTCAGCGG TTCCCAGAAT GTCGTCGAGG CGGCCATTGA CTGCGGTGTC
CGGAAAGTCA TCGCGCTTTC AACGGACAAA GCCTCCAGCC CTATCAATCT TTATGGGGCG
ACCAAGCTGG TAGCGGACAA ACTGCTGGTG TCGGCCAATC ACTACGCTTC CCACCATGTG
ACCCGGTTCG CCGTGGTCAG GTACGGCAAC GTGATGGGCA GCCGCGGCTC GGTGATCCCC
TACTTCCAGA AACTGGCGGC CGAGGACAAG AGCCTGCCGA TCACCGACAA GCGGATGACC
CGCTTCTGGA TCACCCTGGA CCAGGCCGTC CGTTTCGTGG TCGACTCCTT CGACCTGATG
CAGGGCGGCG AGCTCTACGT CCCGCGCATC CCCAGCATGC GGATCGTGGA TCTGGCCGAG
GCCGTCGCGC CGGGCGCCGC GATGCACGAG GTCGGCATCC GCCCGGGGGA GAAGCTCCAC
GAAGAGATGA TCGCCGCCGA CGACAGCCGC AGGACGATCC GGCTCGCCAC CCGCTACGTG
GTCCAGCCCA CCATCGCGAC CTGGGGTTAC GTCCCTCCGC CCGGCGGCCA GAACGTCCCC
GAGGGGTTCT CCTACCGTTC CGACGGCAAC GACCAGTGGC TGTCGGTCGA GGGCATCCGC
GAGCTGCTCG CGGTGAGGGT CTGA
|
|---|
| Protein sequence | MGELEGASIL VTGGTGSFGK AFIRHVLDHH DPRRVVVFSR DELKQYEVRQ LFADDSRLRW
FIGDVRDRSR LTRAMHGVDH VVHAAALKQV DTAEYNPFEY VLTNVSGSQN VVEAAIDCGV
RKVIALSTDK ASSPINLYGA TKLVADKLLV SANHYASHHV TRFAVVRYGN VMGSRGSVIP
YFQKLAAEDK SLPITDKRMT RFWITLDQAV RFVVDSFDLM QGGELYVPRI PSMRIVDLAE
AVAPGAAMHE VGIRPGEKLH EEMIAADDSR RTIRLATRYV VQPTIATWGY VPPPGGQNVP
EGFSYRSDGN DQWLSVEGIR ELLAVRV
|
|---|
| |