| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1197 |
|---|
| Symbol | |
|---|
| ID | 8664472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 1221608 |
|---|
| End bp | 1222918 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein |
|---|
| Protein accession | YP_003336938 |
|---|
| Protein GI | 271962742 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.836411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.392428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGACGCG TCGGCATCCG CTGCGACGCG GGCGTCGGCC GCGGCGTCGG CCACCTGATG
CGCTGCCTGG CCCTCGCCGA GGAACTGCGG GAGCGGCGGC TGGAGGTCGT CGTCCTCGGC
GACATGGGCG GGCTGGAGTG GGCCGCGGAG CAGCTGGCCC GGCGCGGCCT GCGGCTGCTC
CCCGGGCCGG GCGACGCGGC CGCCATGGTC CGGGCCGTCC GCCGCCTCGC GCTCGACGCC
GTGGTCGTCG ACTCCTACGA TCTCGACCCC CGCTGCTCGG GAGCGCTCCG CCAGGCCGGG
GTGCGGGTGC TGGCCGTCGT CGACGACGAC GACCGCGGCC AGGACGCCGA CATCTATCTG
GACCAGAACC TCGGCGCCGA GCGCCGGGCC GGCCGCGTTC CCTCCGGATC GATCCGGCTC
GCCGGGGTGC GCTACGCCCT CCTCCGCGAC GACGTACGGC GTCTGCGCCA GGGACCGATG
GAGCCCGGAC GGCCGGACGG CGTGCTGACG GATCACCGGC AGCCGGACCC GGGGCCGGCG
GAGCCTCAAC GGTTGGACGG AGCACTACCG GACCACCGGC AGCCGGACCC CGGGACGGCG
GAGCCTCAAC GGTTGGACGG AGCACTGCCG GACCACCGGC AGCCGGACCC CGGGGCGGCG
GAGCCTCAAC GGTTGGACGG AGCACTACCG GACCACCGGC AGCCGGACCC CGGGGCGGCG
GAGCCTCGAC AGCCGGGCGG AGCGCTGACG GATCACCGGC AGCCGGGTGG AGTGCCGGTG
GAGCCCGGAC GGCCGCCTCG GGTGCTGTGC TTCTTCGGCG GCACCGACGC GGCCGGGGCG
GCTCCCGTCG TGGTGGGAGA GCTCATCGCG ACGGGCGTGC CGTTCCTGGC GACGGCCGTC
ACCCCGCGCG AGCGGGCGCT GGACCACCTC CAACCGGCCG GCGACCAGAC GGTCCGCCGG
ATTCCCCCCA CCGACGACCT TCCCCGGCTG ATCGCGGCGG CGGACCTCGT CGTCACGGCG
GCGGGGAGCA GCATGTGGGA TCTCCTCTAC CTGGGGAAGG CCGCCGCGCT CGTCTGGGTG
GCGGCGAACC AGCGGCCGGG TTACGAGGAG GTGCTCTCGC GCGGGCTGGC CGCCGGGCTC
GGGCACCTCG ACGCCGTGGT CCGTACGGGT GGCCCCGCCC GCGCGTGCCT GCGGGAACTG
CTCACCTCCG CACGGTCCCG CGAGGAGCTG GGCGCGCGGG GGCCCGCGCT GGTCGACGGC
GAGGGCAGGG CGAGGGTCGC CGACGCCCTG CTCTCCCCGA TCTCCCCGTG A
|
|---|
| Protein sequence | MRRVGIRCDA GVGRGVGHLM RCLALAEELR ERRLEVVVLG DMGGLEWAAE QLARRGLRLL
PGPGDAAAMV RAVRRLALDA VVVDSYDLDP RCSGALRQAG VRVLAVVDDD DRGQDADIYL
DQNLGAERRA GRVPSGSIRL AGVRYALLRD DVRRLRQGPM EPGRPDGVLT DHRQPDPGPA
EPQRLDGALP DHRQPDPGTA EPQRLDGALP DHRQPDPGAA EPQRLDGALP DHRQPDPGAA
EPRQPGGALT DHRQPGGVPV EPGRPPRVLC FFGGTDAAGA APVVVGELIA TGVPFLATAV
TPRERALDHL QPAGDQTVRR IPPTDDLPRL IAAADLVVTA AGSSMWDLLY LGKAAALVWV
AANQRPGYEE VLSRGLAAGL GHLDAVVRTG GPARACLREL LTSARSREEL GARGPALVDG
EGRARVADAL LSPISP
|
|---|
| |