Gene Sros_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1178 
Symbol 
ID8664453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1204402 
End bp1205145 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336919 
Protein GI271962723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.843177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCC GCGTCACCAC ACTCGCCGAA CGTCCGGAGT TCACCGGGCA GCTGTGGGCC 
ATGGACAACT CGTGGCCCGA GTTCATGTTC CACGACCGGA TGGCGGCCCT CTACTTCGAG
GTCTGCACGA CGGTCTATCC GGAGTTCGTC CTGGTGGCCG ACGACGACGC CGACCCGGGC
CGCCTGGTCG CCAAGGGCCT CAGCGTCCCC TTCGCCTGGA AGCACGAGGA CCTGCCCGAC
GACGGCTGGG ACGCGGCGGT CCTGCGGTCC TGGAACACCC GGCGGACCGG TGAGAAACCC
ACCGTGGTCT CCGCGCTGGA GATCACCATC CGGCCCGACC GCATCGGCTC CGGGCTCTCG
CCCCTCATGC TGGGGGCCAT GCGGGACAAC GCCGCCCGCC TGGGGTTCGG TGAGCTGATC
GCCCCGGTGC GGCCCAACGC CAAGCATCTG GAGCCGCGCA CCCCGATGGC GGAGTACGCC
GCGCTGACCC GGCCCGACGG CCTGCCGGCC GATCCGTGGC TACGGGTCCA CGTGCGCGCG
GGCGGCACGA TCGCGAAGGT GGCGCCCCGC TCGATGACTG TGGCCGGCAC GCTCGCCGAA
TGGCGGAAGT GGTCCGGCTG CGCCTTCGAC GAGAGCGGCC CGGTCGAGGT GCCCGGAGCC
CTGGTCCCGG TCCACTGCGA CGTCGACCAG GACCACGCCG TCTACGTCGA GCCCAACGTC
TGGGTCCGCC ACCGGCTGAC CTGA
 
Protein sequence
MSVRVTTLAE RPEFTGQLWA MDNSWPEFMF HDRMAALYFE VCTTVYPEFV LVADDDADPG 
RLVAKGLSVP FAWKHEDLPD DGWDAAVLRS WNTRRTGEKP TVVSALEITI RPDRIGSGLS
PLMLGAMRDN AARLGFGELI APVRPNAKHL EPRTPMAEYA ALTRPDGLPA DPWLRVHVRA
GGTIAKVAPR SMTVAGTLAE WRKWSGCAFD ESGPVEVPGA LVPVHCDVDQ DHAVYVEPNV
WVRHRLT